| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8026 |
|---|
| Symbol | |
|---|
| ID | 8671354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 8839395 |
|---|
| End bp | 8840171 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | 5-carboxymethyl-2-hydroxymuconateDelta- isomerase |
|---|
| Protein accession | YP_003343424 |
|---|
| Protein GI | 271969228 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.607229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTATAG CGAGGTTCTC CACAGGTGAG GGTGTCGGAT TCGGCGTGGT CGAGGGCGGA
CCCGGCGAGG AGTTCATCTC CGCGATCTCC GGCCACCCCT TCGGCCCGAT CCAGTTCACC
GGTGAGCGTT ACTCGCTCTC GCAGGTCAAG CTGGTCGCGC CCATGTTGCC CAGCAAGGTC
GTCGCGATCG GCAGGAACTA CGCCGACCAC GCCCGCGAGA TGGGCGGAGA CGTCCCCGAC
GAGCCGCTGG TCTTCCTGAA GCCCTCCACC TCGGTGATCG GTTCGGGGGA GGCCATCGCC
TACCCGACGG GGCTGTCCCG GCGGGTCGAC TTCGAGGGGG AGCTGGCCGT GGTCATCGGC
AGGCTCTGCC GGGAGGTCCC CGCGGAGCGG GCCCACGAGG TCGTCTTCGG CTACACCTGC
GCCAACGACG TCACGGCCCG GGACCTGCAG AAGAAGGACG TCCAGTTCAC CCGCGCCAAG
GGCTTCGACA CCTTCTGCCC GCTCGGCCCG TGGATCCAGA CCGAGCTCGA CCCGGGTGAC
CTGGGCATCA CCACGACGGT GAACGGCGAG ATCAAGCAGA GCTCGCGCAC CTCCAAGCTC
ATGTACGACA TCCCGACGCT GATCGCCCAC GTGAGCGCGG TCATGACCCT GATCCCCGGC
GACGTCATCC TCACCGGGAC GCCCGAGGGG GTCGGCCCGC TGGACGTCGG CGACGAGGTC
AGCGTCGGCA TCGAAGGAAT CGGCACTCTC ACCAACCGGG TGGTCTCCCG TGACTAG
|
|---|
| Protein sequence | MRIARFSTGE GVGFGVVEGG PGEEFISAIS GHPFGPIQFT GERYSLSQVK LVAPMLPSKV
VAIGRNYADH AREMGGDVPD EPLVFLKPST SVIGSGEAIA YPTGLSRRVD FEGELAVVIG
RLCREVPAER AHEVVFGYTC ANDVTARDLQ KKDVQFTRAK GFDTFCPLGP WIQTELDPGD
LGITTTVNGE IKQSSRTSKL MYDIPTLIAH VSAVMTLIPG DVILTGTPEG VGPLDVGDEV
SVGIEGIGTL TNRVVSRD
|
|---|
| |