Gene Sros_8017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8017 
Symbol 
ID8671342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8827755 
End bp8828342 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content68% 
IMG OID 
Productisopropylmalate isomerase small subunit 
Protein accessionYP_003343415 
Protein GI271969219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTT TCACCACCCA CACCGGCCGG GCCGTGCCGC TGCGCCGCAG CAACGTGGAC 
ACCGACCAGA TCATCCCGGC GGTCTGGCTC AAGCAGGTCA GCCGGACCGG ATTCGAGAAG
GGCCTGTTCT CGGCCTGGCG CGAGGACCCG GCGTTCGTCC TGAACGACCC CGTCCACGAG
GGCGCATCGA TCCTCGTCTC CGGACCCGAC TTCGGCACCG GCTCCTCGCG CGAGCATGCC
GTCTGGGCTC TGCAGCAGTA CGGCTTCCGC GTCGTGATCG CGGCCCGTTT CGGCGATATC
TTCCGTAATA ATTCCACCAA GATGGGCTTG CTGCCGGTTG TCCTGCCGGC CGCCGCCGTC
GAGGCCCTGC AGGCGGCCGT GGAGGCCGAT CCCACTCTGG AAATCACGGT TGACCTGGGG
GAACGCCAGG TCCGCTGGGC CGGGGAGATC GCCGGGTTCG AGATCGACGA CTACACGCGC
TGGCGGCTGA TGGAGGGGCT GGACGACATC GGGCTGACCC TGCGTAATGC CGATGCCGTC
GCGGTGTACG AGAATGGGCG GCAGCCATGG CTGCCGACGA CCGTCTGA
 
Protein sequence
MEAFTTHTGR AVPLRRSNVD TDQIIPAVWL KQVSRTGFEK GLFSAWREDP AFVLNDPVHE 
GASILVSGPD FGTGSSREHA VWALQQYGFR VVIAARFGDI FRNNSTKMGL LPVVLPAAAV
EALQAAVEAD PTLEITVDLG ERQVRWAGEI AGFEIDDYTR WRLMEGLDDI GLTLRNADAV
AVYENGRQPW LPTTV