Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_7988 |
Symbol | |
ID | 8671313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 8801364 |
End bp | 8802146 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003343386 |
Protein GI | 271969190 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.34701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.255367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGACTGC AAGCCGTCGA CGTCAGGCTG GGCTACGGCG ACCGTGTCAT CGTCGACGGC CTCGATCTCG GGATCGAGGC CGGAACGGTG ACCACGATCA TCGGGCCGAA CGGGTGTGGC AAGTCCACGC TGCTGCGCGC GCTGGGACGG CTGCTCCGGC CGTCGGGCGG CGAGGTCCTC CTGGACGGCA AGCGCATCGA CAGGATGCCC ACCAAGGAGG TCGCCAAGGT CCTCGGCGTG CTGCCGCAGG CTCCGACGGC CCCGGAGGGG CTGACCGTGG CCGACCTGGT GGCCCGGGGA CGGCACCCGC ACCAGACGTG GTACCGGCAG TGGTCCTCCG ACGACGAGGC GGCGGTCAGC GAGGCTCTGG CCATGACCGG CCTGCTCGAG CTGGGCGAGC GCCCGCTGGA CGAGCTGTCC GGCGGGCAGC GCCAGCGGGC GTGGATCTCG ATGGCCCTCG CCCAGGGCAC CGACCTGCTC CTGCTCGACG AGCCCACGAC CTTCCTCGAC CTGGCCCACC AGGTCGAGGT CCTGGAGCTG GTCCGCAGGC TCCACGGCGA GCTCGGCCGC ACCGTGGTGA TGGTCCTGCA CGACCTCAAC CTGGCCGCCC GCTACGCCGA CCGCCTGGTC GCCATGCGCG GCGGCAAGGT CATCGCCGCC GGGCCGCCGC ACGAGGTCCT CACCGAGCCC CTCCTCGCGG AGGTCTTCGA CCTGGACGCC AAGGTGATCG AGGACCCCGT AGCCGGAACC CCCCTGGTCG TCCCGGTCGG CGTGCGCCAC TAG
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Protein sequence | MRLQAVDVRL GYGDRVIVDG LDLGIEAGTV TTIIGPNGCG KSTLLRALGR LLRPSGGEVL LDGKRIDRMP TKEVAKVLGV LPQAPTAPEG LTVADLVARG RHPHQTWYRQ WSSDDEAAVS EALAMTGLLE LGERPLDELS GGQRQRAWIS MALAQGTDLL LLDEPTTFLD LAHQVEVLEL VRRLHGELGR TVVMVLHDLN LAARYADRLV AMRGGKVIAA GPPHEVLTEP LLAEVFDLDA KVIEDPVAGT PLVVPVGVRH
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