Gene Sros_7988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7988 
Symbol 
ID8671313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8801364 
End bp8802146 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003343386 
Protein GI271969190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.34701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.255367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACTGC AAGCCGTCGA CGTCAGGCTG GGCTACGGCG ACCGTGTCAT CGTCGACGGC 
CTCGATCTCG GGATCGAGGC CGGAACGGTG ACCACGATCA TCGGGCCGAA CGGGTGTGGC
AAGTCCACGC TGCTGCGCGC GCTGGGACGG CTGCTCCGGC CGTCGGGCGG CGAGGTCCTC
CTGGACGGCA AGCGCATCGA CAGGATGCCC ACCAAGGAGG TCGCCAAGGT CCTCGGCGTG
CTGCCGCAGG CTCCGACGGC CCCGGAGGGG CTGACCGTGG CCGACCTGGT GGCCCGGGGA
CGGCACCCGC ACCAGACGTG GTACCGGCAG TGGTCCTCCG ACGACGAGGC GGCGGTCAGC
GAGGCTCTGG CCATGACCGG CCTGCTCGAG CTGGGCGAGC GCCCGCTGGA CGAGCTGTCC
GGCGGGCAGC GCCAGCGGGC GTGGATCTCG ATGGCCCTCG CCCAGGGCAC CGACCTGCTC
CTGCTCGACG AGCCCACGAC CTTCCTCGAC CTGGCCCACC AGGTCGAGGT CCTGGAGCTG
GTCCGCAGGC TCCACGGCGA GCTCGGCCGC ACCGTGGTGA TGGTCCTGCA CGACCTCAAC
CTGGCCGCCC GCTACGCCGA CCGCCTGGTC GCCATGCGCG GCGGCAAGGT CATCGCCGCC
GGGCCGCCGC ACGAGGTCCT CACCGAGCCC CTCCTCGCGG AGGTCTTCGA CCTGGACGCC
AAGGTGATCG AGGACCCCGT AGCCGGAACC CCCCTGGTCG TCCCGGTCGG CGTGCGCCAC
TAG
 
Protein sequence
MRLQAVDVRL GYGDRVIVDG LDLGIEAGTV TTIIGPNGCG KSTLLRALGR LLRPSGGEVL 
LDGKRIDRMP TKEVAKVLGV LPQAPTAPEG LTVADLVARG RHPHQTWYRQ WSSDDEAAVS
EALAMTGLLE LGERPLDELS GGQRQRAWIS MALAQGTDLL LLDEPTTFLD LAHQVEVLEL
VRRLHGELGR TVVMVLHDLN LAARYADRLV AMRGGKVIAA GPPHEVLTEP LLAEVFDLDA
KVIEDPVAGT PLVVPVGVRH