| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7984 |
|---|
| Symbol | |
|---|
| ID | 8671309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 8796948 |
|---|
| End bp | 8798024 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
|---|
| Protein accession | YP_003343382 |
|---|
| Protein GI | 271969186 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.431084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.171031 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACG TGGATCGACA CGACCCCGAG ACCCGCTCCT GGGTGGCCGA AGCCATCCGC
CGAGTCGAGG CCGACGCCCA TAGAAGCTGC GACACCCATC TCCACGTCTT TCCGCTTCCC
CCGCGGTGGG GGGTAAACCT CTACCTGAAA GACGAGTCAG TCCACCCCAC CGGTTCACTC
AAGCACCGGC TCGCGCGCTC CCTGTTCCTG TACGGCCTGG CGAACGGCTG GATCGGTCCC
AGCACCACGG TCGTCGAGGC GTCCAGCGGT TCGACGGCGG TGAGCGAGGC CTACTTCGCC
CGGCTCATCG GCCTGCCGTT CATCGCGGTG ATGCCCGCCT CGACCTCGCC GGAGAAGATC
GCGCTGATCG AGTTCTACGG CGGCAAGTGC CACCTGGTGA ACGATCCCGG AACCATCTAC
GAGGAGTCCC ACCGGCTGGC CGTGGAGACC GGCGGGCACT TCATGGACCA GTTCACCTAC
GCCGAGCGGG CCACCGACTG GCGCGGCAAC AACAACATCG CCGAGAGCAT CTTCAGCCAG
ATGGAGATGG AGCCCCACCC CGAGCCCACC TGGATCGTGG TCGGCGCCGG CACCGGCGGC
ACCTCCTCCA CCATCGGCCG CTACATCCGC TACCGGCGTT ACTCCACCCG CCTGGCCGTG
GTCGACCCCG AGGGCTCGGC GTTCTACTCC TCCTGGTGCT CGGGCGACGC CGCGGCCACC
GCGCCCGGCT CCCGCATCGA GGGCATCGGC CGTCCCCGCG TGGAGCCGTC CTTCATGCCC
ACCGTGATCG ACCGCATGAT CCAGGTCCCC GACGCCCGGT CCATCGCGGC CATGCGCTGG
GTCCGCGAGG TCACCGGGCG CGACGTGGGC GGCTCCACCG GCACCAACGT GGCCGCGGCC
GTGCAGATCC TGCGGGAGAT GCGCCAGGCG GGCGAGCAGG GCAGCGTCGT CACGCTGATC
TGCGACGGCG GCGAACGTTA CCGGGGCACC TACGACGACG ACTCCTGGCT GGCGGAACGG
GGCCTGGACA TCGCCCCCCA TCTGGAGGAG CTGAGGTCCT TCCTCGCCCA GCCCTGA
|
|---|
| Protein sequence | MEYVDRHDPE TRSWVAEAIR RVEADAHRSC DTHLHVFPLP PRWGVNLYLK DESVHPTGSL
KHRLARSLFL YGLANGWIGP STTVVEASSG STAVSEAYFA RLIGLPFIAV MPASTSPEKI
ALIEFYGGKC HLVNDPGTIY EESHRLAVET GGHFMDQFTY AERATDWRGN NNIAESIFSQ
MEMEPHPEPT WIVVGAGTGG TSSTIGRYIR YRRYSTRLAV VDPEGSAFYS SWCSGDAAAT
APGSRIEGIG RPRVEPSFMP TVIDRMIQVP DARSIAAMRW VREVTGRDVG GSTGTNVAAA
VQILREMRQA GEQGSVVTLI CDGGERYRGT YDDDSWLAER GLDIAPHLEE LRSFLAQP
|
|---|
| |