Gene Sros_7983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7983 
Symbol 
ID8671308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8796082 
End bp8796678 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content67% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003343381 
Protein GI271969185 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.225021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.220748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCACGA TGACCGAAGA GCAGCGCCAG GACTGGTTCG AGCGCGACGT TGTACCGGTC 
ACCAACCAGC TCTACGCGTC CGCGATGCGT CTGACCCGCA ACTCCGCCGA TGCCGAGGAC
CTCGTCCAGG AGACCGTGAC CAAGGCGTTC ACCTCCTATC ACCAGTTCCG CGAGGGCACC
AACCTCAAGG CGTGGCTGCA CCGCATCCTC ACCAACAACT TCATCAACGA CTACCGCAAG
AAGCAGCGCT CGCCCAAGCT CTCGGCCACC GAGGAGATCG AGGACTGGCA GCTCGCCGCC
GCCGAGTCCC ACATGTCCTC CGGGCTCAAG TCCGCCGAGA CCGAGGCGCT GGAGCAGCTG
CCCGACAGCG CCGTGATGAA CGCCCTGCGC GCCTTGCCCG AGGACTTCCG GGTGGCCGTC
TACCTGGCCG ACGTGGAGGG CTTCGCCTAC AAGGAGATCG CCGAGCGGAT GGGCACCCCC
ATCGGCACGG TCATGTCGCG CCTGCACCGG GGCCGCCGCC AGCTCCGGAC GATGCTGGAG
GACTACGCCA TCGAGGAAGG CGAGTTCCGG CTGCCCGCGC AGCGTCAGGC CGCGTAG
 
Protein sequence
MITMTEEQRQ DWFERDVVPV TNQLYASAMR LTRNSADAED LVQETVTKAF TSYHQFREGT 
NLKAWLHRIL TNNFINDYRK KQRSPKLSAT EEIEDWQLAA AESHMSSGLK SAETEALEQL
PDSAVMNALR ALPEDFRVAV YLADVEGFAY KEIAERMGTP IGTVMSRLHR GRRQLRTMLE
DYAIEEGEFR LPAQRQAA