Gene Sros_7928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7928 
Symbol 
ID8671253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8739799 
End bp8740620 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content72% 
IMG OID 
Product3-oxoadipate CoA-transferase 
Protein accessionYP_003343327 
Protein GI271969131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.386225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.327959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGG TGACTTCGCT CGCCGACGCG GTGGCGGATC TCGTGCACGA CGGCGACAGT 
GTGGCGCTGG AGGGCTTCAC CCACCTGATC CCCTACGCGG CCGGACACGA GATCATCCGG
CAGGGGCGCC GCGACCTCAC GCTGATCCGG ATGACCCCCG ACCTGATCTA CGACCAGATG
ATCGGGATGG GCTGCGCCCG GCGGCTGGTC TTCTCCTGGG GCGGCAACCC GGGGGTGGGG
TCGCTGCACC GCTTCCGCGA CGCGGTGCAG AACCGCTGGC CCGCGCCGCT GGAGATCGAG
GAGCACAGCC ACGCGGGCAT CGCCAACGCC TACGTCGCCG GCGCGTCCGG GCTGCCCTTC
GCGGTGCTGC GCGGCTACCG GGGCACCGAC CTGCCCGGCC ACACCGCCAC GGTCAGGCCG
ATCACCTGCC CGTTCACCGG CGAGGAGCTC ACCGCCGTCC CCGCGATCAA CCCCGACGTC
GCCGTCGTGC ACGCGCAGCG CGCCGACCGG CGGGGCAACG TGCAGCTCTG GGGGATCACC
GGGGTGCAGA AGGAGGCACT CCTGGCGGCG CGACGCTCGC TGGTCACCGT GGAGGAGATG
GTCGAGGAGC TGGAGCCCCG TCCCGGCGCG ATCGTGCTGC CCGGCTGGGC GATCACCCAC
GTCTCCGAGG TCCCCGGCGG TTCCCACCCC TCCTACAGCG CCGGCTACTC CACCCGGGAC
AACGGTTTCT ACCTCGCCTG GGACGAGATC AGCCGTAGCC GCGAGACCTT CACCGCCTGG
ATGGAAGAGC ACGTCCTCGC CGGCGCGGAG GCCCGCCGGT GA
 
Protein sequence
MATVTSLADA VADLVHDGDS VALEGFTHLI PYAAGHEIIR QGRRDLTLIR MTPDLIYDQM 
IGMGCARRLV FSWGGNPGVG SLHRFRDAVQ NRWPAPLEIE EHSHAGIANA YVAGASGLPF
AVLRGYRGTD LPGHTATVRP ITCPFTGEEL TAVPAINPDV AVVHAQRADR RGNVQLWGIT
GVQKEALLAA RRSLVTVEEM VEELEPRPGA IVLPGWAITH VSEVPGGSHP SYSAGYSTRD
NGFYLAWDEI SRSRETFTAW MEEHVLAGAE ARR