Gene Sros_7890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7890 
Symbol 
ID8671213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8698275 
End bp8698652 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content67% 
IMG OID 
Productanti-sigma-factor antagonist 
Protein accessionYP_003343291 
Protein GI271969095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.737942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGAG AGCTGGTCAT CCGCGTCACC CATCACGAGG AGACGGGCTG CGCCGTGCTC 
ACCGTGAGGG GGGACATCGA CCGCAACTCC AGCCCTCTCC TCAGGGAGGC CATCGGAGAG
CTGGTCTCCG ACCGGCGCGT CAGGATCGTC CTCGACGTCG AGGGGGTCAC CTTCTGCGAC
TCCAACGGCC TGCGGACATT CCTCAGCGGG ATGACTTCGA CCTTCGAGGC GGGCGGATGG
CTGCGGCTGG CGGGGGTGCG GGGCCATTTC GAGCGGCTGC TGCGCATGAC CGACCTCTAC
AATTTCTTCT CCATCGACGC CGACGTGCCC GGCTCGCTGG AGCACGCCTC CCGAGGAGGC
TTCCGGCCCT CCGGATGA
 
Protein sequence
MSRELVIRVT HHEETGCAVL TVRGDIDRNS SPLLREAIGE LVSDRRVRIV LDVEGVTFCD 
SNGLRTFLSG MTSTFEAGGW LRLAGVRGHF ERLLRMTDLY NFFSIDADVP GSLEHASRGG
FRPSG