Gene Sros_7854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7854 
Symbol 
ID8671177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8665475 
End bp8666308 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content70% 
IMG OID 
ProductProtocatechuate 3 4-dioxygenase beta subunit- like protein 
Protein accessionYP_003343260 
Protein GI271969064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCCG AGAACACCCG CGACGACAAC ATCGAAGGCA AGGAATCCAG GGGCATCAGC 
CGCAAGACCC TGCTGAAGGC CGCCCTGATA GCCCCGGCGG CTCCGCTGCT GTTCGGGGCC
CCCGCGCTGG CCCGCAACGC GCAGGGGACG GGCCAGCTGC TCGACCCCAC GCCGTTCTGC
GACGACGGCG ACGACCCGAC GATCGCCCAG ACCGAGGGCC CCTACTTCAA GCCCAACTCG
CCCCTGCGGA GCACGCTGAC CGGCCCCGGC GTCCCGCTGA CCGTCAGCGG CTACGTCTTC
GGCCGGTCGT GCCAGCCGAT CGCCAACGCG CTGCTGGACT TCTGGCAGGC GGACACCAAC
GGTGCCTACG ACAACACCGG GTACACCTTC CGCGGGCACC AGTTCAGCGA CGCCCAGGGC
GCGTTCAAGC TGACCACGAT CGTGCCGGGC CTGTATCCGG GCCGCACCCG GCACATCCAC
GTCAAGGTCC AGGCCCCGAA CCGGCCGGTC CTCACCACCC AGCTCTACTT CCCGAACGAG
CCGCGCAACA ACACCGACAC CATCTTCCAC CCGTCGCTGC TCATGAACGT GCGCACGGTC
GGCTCGGGAA GGGAGGCGAG CTTCGACTTC GTTCTCAACA TCATCGGCAC GCCGTCCCCC
AGCCCGACGC CGACCACGAC CCCGCCCCCG AGCGGCACCT GGAGGGCCGG CGCGAGCTAC
CGAGCCGGTG ACCAGGTCAC CTACGCCAAC CTGACCTACC GGTGCCTGCA GGCGCACACC
GCCTACGCCG GATGGGAGCC CCCGAACGTG CCGGCTCTCT GGCAGCGCGT CTGA
 
Protein sequence
MDAENTRDDN IEGKESRGIS RKTLLKAALI APAAPLLFGA PALARNAQGT GQLLDPTPFC 
DDGDDPTIAQ TEGPYFKPNS PLRSTLTGPG VPLTVSGYVF GRSCQPIANA LLDFWQADTN
GAYDNTGYTF RGHQFSDAQG AFKLTTIVPG LYPGRTRHIH VKVQAPNRPV LTTQLYFPNE
PRNNTDTIFH PSLLMNVRTV GSGREASFDF VLNIIGTPSP SPTPTTTPPP SGTWRAGASY
RAGDQVTYAN LTYRCLQAHT AYAGWEPPNV PALWQRV