Gene Sros_7852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7852 
Symbol 
ID8671175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8662387 
End bp8663856 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content72% 
IMG OID 
ProductAmino acid transporter-like protein 
Protein accessionYP_003343258 
Protein GI271969062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.512635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG AACTGCGTTC CCCCCGCAAG CTACGCCTGT GGGAAGCGCT GGCCCTGTCC 
GTGGGGCTCA TGGGCCCCAC TCTCGCCATG GCCCTGAACG GCGCCGGCGT GTCCGCCACG
GTCGGCAAGG CCGTACCGCT CGTCTTCGTC CTCGGCCTGA TCGGGGTCGC GCTGGTCGCC
TACGGTTTCG TACGGCTGAC GCGGCACTTC AACCACGCCG GATCGGTCTA CGCCCTGGCC
GGGGTGACCC TCGGGCCCCG GGCCGGGTTC TTCGGCGGGT TCGCCCTGCT GGGGACCTAC
ATCTTCTTCG CCGTGTGCAC GCTGGCGGCG ACCGCGGTGT TCACCGAGGC GTTCGCCGCC
GCCCTGGGCC TGTCCCTGGA CGTCCCGTGG TTCGCCGTGG CCGCAGTCGC GGCCGTCGGC
GTCTGGGCGG TCAACTCCCG CGAGTCCCGC ATCACGGCGC GGACCCTGCT GATCGTCGAG
GGCGTCGGCA TCCTCGGCAT GCTGGTGCTC AGCGCCATCA TCGTCATCCG CACCGGGACC
GGGCACGCGC CCGGCGGGCA GACGCTCGAC CTGTCGGTGT TCGGGCTGGG CGGCACCACG
ATGAGCGCGG TGATGACCGC CACGGTGTTC GCGTTCCTGT CCTGGGCGGG CTTCGAGGCG
TGCGCGTCGC TGGGCGAGGA GACCGCCGAC CCGCGCCGCA ACGTCCCGCG CGCCCTGGCC
GGAAGCGTGC TGCTCACCGG CGGCCTGTAC GTCTTCGTGA TGTTCGCCCA GACCGTCGGC
TTCGGCACGG ACGAGAAGGG GGTCGCCGCC TTCTCCGGCT CCGAGTCCTC CCTGTCGGCG
CTCGCGCAGA CCTACATCGG CACGTGGTTC TCGCTGGTCA TCGCCTTCAC CGCGGTGGCG
TCGGCGTTCG CGGCCTCGAT CAGCTCGACC GCGGCGGCGA GCCGGCTCAT GTTCGCCCTC
GCCCGGGACG GCTTCGGCCC GAAGGCCCTC GCCCGCACCG ACCGCCGTAC CGGGAGCCCC
ACGGTCGCGC TGGTGGCCGC GCTGGTCCTC GCCGTGGCCG GCGACGTGAT CCTCGACCTC
ACCGGCGTCC ACGCCTTCGA CGCCTACTAC TGGTTCGCCA CGCTCGGCGT GCTGTGCCTG
CTGGTGGCCT ACGCGGTCGC CGGGGCGGGC GTGATCGCGT TCATCCTCTC CGGGCGCGGC
CGGATCCCCC GGCACGAGAT CGTGATCCCG GTGCTCGCCA TCGCCTACCT GTGCTTCGTC
TTCTACAACC AGTCGGTGGG ACAGGCCAGC CCGCTCAGCT ACTTCCCGTG GATCGCCGCC
GCCTGGTGCC TGGCGGGCAT GGTGACCGTA CTGGCCGCGC CGAAGCTGGC ACGCCGGATC
GGCGAGCGCC TGACCGCCGA GCTGACCCGG CCCGACGACC CCGCCGGTAC GAGTCCCACC
CCTGAGGCCC GGAAGGCGGC CCAGGCATGA
 
Protein sequence
MTEELRSPRK LRLWEALALS VGLMGPTLAM ALNGAGVSAT VGKAVPLVFV LGLIGVALVA 
YGFVRLTRHF NHAGSVYALA GVTLGPRAGF FGGFALLGTY IFFAVCTLAA TAVFTEAFAA
ALGLSLDVPW FAVAAVAAVG VWAVNSRESR ITARTLLIVE GVGILGMLVL SAIIVIRTGT
GHAPGGQTLD LSVFGLGGTT MSAVMTATVF AFLSWAGFEA CASLGEETAD PRRNVPRALA
GSVLLTGGLY VFVMFAQTVG FGTDEKGVAA FSGSESSLSA LAQTYIGTWF SLVIAFTAVA
SAFAASISST AAASRLMFAL ARDGFGPKAL ARTDRRTGSP TVALVAALVL AVAGDVILDL
TGVHAFDAYY WFATLGVLCL LVAYAVAGAG VIAFILSGRG RIPRHEIVIP VLAIAYLCFV
FYNQSVGQAS PLSYFPWIAA AWCLAGMVTV LAAPKLARRI GERLTAELTR PDDPAGTSPT
PEARKAAQA