| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7833 |
|---|
| Symbol | |
|---|
| ID | 8671156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 8633748 |
|---|
| End bp | 8638919 |
|---|
| Gene Length | 5172 bp |
|---|
| Protein Length | 1723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003343239 |
|---|
| Protein GI | 271969043 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTCT TTCAGGTACA TGAGCGGCTA ATCGCCGACT ACGACCGGTT CACGACCTCG
CTCGTGCACG TCCGCGACGA CCGCATCGCC CGGCACCTGG AAGACGAGCG AGAGGCTCGC
GTGCGATGGC CGCATCCATG GGTCTCGCTG AATCCCAGCT TCGCCGGTGG GGGAACGGTC
TCCGAGCTGG TCGGAGCGGG GCTGCTGCAC CCGATGTGCG AGCGTCTCTT CAGAATCAAG
ACCGATGGGA ACGATCCAGG GGATCGATCC CTCTCGCTCC ACCGCCACCA GCGCGAGGCG
GTCGAGGCGG CCCGCGACGG CGGTAGCTAC GTCCTGACCA CCGGGACGGG CTCCGGCAAG
AGCCTCGCCT ACATGGTCCC GATCGTCGAT TCCGTTCTCC GTGACCCCGA CCCCGGCCGG
GTCAAGGCGA TAGTCGTCTA TCCGATGAAT GCGCTGGCCA ACAGCCAGCT TCACGAGCTG
GAGCGATTCC TCGAATGGGG ACTCCCCAAG GACGCGCGTC CGGTCAGCTT CGACCGTTAC
ACCGGGCAGG AGAGCGAGGA GAAGCGCAAC CGTATCCTCG CCCGTAAGCC GGACATCCTG
CTCACCAACT ACGTGATGCT GGAATACCTG CTCACCAGGC CCGATGAGCG CAGGGATCTG
ATCGGGGCGG CGCAGGGCCT GCGCTTTCTC GTGCTGGACG AGCTGCACAC CTACCGGGGC
CGCCAGGGTG CCGACGTGGC ACTGCTCGTA CGGCGTCTAC GGGACGCCTG CGACACGCCG
GACCTGCAGT GCGTGGGCAC CTCGGCCACG ATGGCGACCA CCAAGACCTT CGCCGAGGCG
CAGACGGTGG TGGCCGAGGT CGCCACCCGC CTGTTCGGCA CCGACGTCAG CCCTGACCGG
GTGATCGGTG AGACTCTCAT CCGTGCGACG AGCGACAAGG CCCCGACCTC CGCCGAGCTT
GTCATCAGCA TGGCGAAGGC CGGCAGTGGC CGGTCTTACG CGGAGCTGGC CGACGACGCC
CTGGCGATCT GGATCGAGTC GGAATTCGGC CTGGAGGCCG AGCCGGGAAG CGACCGGTTG
GTCCGGCGCC GCCCCGAGAA GGTCGCCGAG ACCGCCAAGG CTCTGACCGA TGTCACAGGC
CGGCCCGAGG TCGAGTGCGC GGGTGCGATC GAACGGCTTC TCCAGGAGGG GGCGCGGGCA
CCGCACCCGG AGACCGGACG GCCGCTGTTC GCGTTCCGCC TCCACCAGTT CCTCTCGAAG
GGCGACACCA CCTACGTCAG CCTGGAGCCC GAGGCCGAGC GTCACATCAC CAGCCAGTAC
CAGGTCAGCG TCCCGGGCCA GCGGGAGAAG ATCCTGCTGC CCCTCGCCTT CTGCCGGGAG
TGCGGACAGG ACTACCTGGT CGTCGCAAGG GAGAAAGGCG AGCGCTACAG CGCCCGCCAG
GAAGCGAACG TGCCCGGCGG CGACACGGTC AACGGCTACC TCTACATCAG CACCGAGCAT
CCCTGGCCGG TCGATCCGGT GGGGGAGGGC AGGCTGCCGG ACTCCTGGCT GGAGCCGGCC
GCCGACGGCC GCACGCAGGT GCGCCCGTCG CTGAGCGACC GGCTCCCCCG CGAGGTGTGG
CTCGGCCCCG GTGGTTCCGA GGTCCCCGCC GGTGAGGGCA TCCACGCCTG GTACGTGCCC
TCGCCGTTCC GTTTCTGCCT GCGCTGCCGG GTGTCCTATG AGCAGAGCCG GGGACGGGAC
TTCGCCAAGC TGGCCACCTT CGCGACCGAG GGCCGCAGCT CGGCCGTGTC GATCATCAGC
GCGAGCATCG TGCGGAGCCT CCGTGAGCAG AACGAGAAGG GCCGGCTCGA TGACGAGGCC
CGCAAGTTGC TCACCTTCGT CGACAACCGG CAGGATGCCA GCCTTCAGGC GGGACACCTG
AACGACTTCG TCCAGGTCAC CCAGCTCCGT GGTGCTCTTT ACCGTGCGGC GCGAGCCGCG
GGTGAGGAAG GGCTGCGCCA CGACGAGGTG GCCCAGCGGG TGGCGAAGGT GATGAACCTG
CCGCTTGAGG CCTTCGCCCG CAACCCGGAG GTGAAGTTCG GCCAGAAGGA GGCCGTCCTC
AAGGCGTTCC GCGGGGTCCT CTCCTACCTC ATCTACCTCG ACCTGGAGCG CGGCTGGCGT
ATTACCATGC CGAACCTGGA GCAGACCGGG CTGCTCCGCT TCGACTACGT GGCACTCGAC
GAGATCGCCG CCGACACCGA GCACTGGGAA CGCACCCATC CCGCGCTGCG CACCGACGAG
CCCGCTCATA GGGCCGAGCT GGCCCGCCTC GTGCTGGACG AGATGCGGCG GGCGCTCGCC
GTCGACGTGG ACGAGCTCAC GCCCGAGGGC TTCGAACGGA TCCAGAAGCA GAGCGACCAG
AATCTCACCG GGGCCTGGGC ACTCGCCGAG GGCGGGAACC GCGACAGCGC CCGCACCGTG
TTCGCCCGGT CGGGGCGTCC GGGTGAGAGC CGCGACAGGG TCAACTTCAC CGGCCGGTCC
GGTCTCGGCA GCTATCTCCG CCGCGCGGGA ATGTTCCCCA ACTATGGGCA CAGGCTCACG
GTCGACGACG CTCAAGAGAT CATCGTCGAC CTCCTGTGGG TCCTGGAGAA GTACGGCCTG
CTCACCGAGG TCCAAGAAGG GCGCGACGGG ACGAAGGGCT ACCGTCTCAG GTCCTCCGAG
CTGATCTGGC GAGCCGGAGA CGGCACCACG GGCGCCCCCG ACCCGATCCG GAAGACAGTG
GATCCGGAGG TCGGCACCCG GGTCAGCACG TTCTTCCGCG ACCTCTACGC GGAGGTCGCG
TCCGGGCTCG CGGGCATTCA CGCGGCCGAG CACACCGCCC AGGTGCGAGC CGAGGATCGT
CAGGAGCGTG AGCGGCTGTT CCGCGACGGC GAGCTTCCCC TGCTCTACTG CTCGCCCACG
ATGGAGCTCG GAGTCGACAT CGCCACCCTC AACTCGGTGG CGATGCGCAA CGTGCCGCCG
ACCCCCGCCA ACTACGCCCA GCGCTCCGGC CGGGCAGGGC GGAGCGGCCA GCCGGCCCTC
ATCACCACCT ACTGCTCCAC CGGTAGCTCG CACGACCAGT ACTATTTCCG GCGCAGCCGC
CTGATGGTCG CCGGGAGCGT CCAGCCGCCC CGGCTCGACC TGACCAACGA GGATCTGATC
CTCTCCCACG TCCACGCCAT CTGGCTGGCG GAGACGGGCG CGCAACTGCA CAGCCAGATG
GCCGACGTGA TCGACATCTC ACGCCTGGAC AGGCTGCCCC TGCACGAGCA CATCCGGATC
CAGCTTGCCG ACGACAGCGC GCGCCGCCGG GCCGTACCGC GTGCCCGGCG CATGCTCGAC
ACCATCGCGA AGACCGAGCG GCTGGACAGG ACCACCTGGT GGGACGAGGG CTGGGTCGAG
CGGAAGGTGC TCGGGGCGGC TGAAAAGTTC GACGCCGCCT GCGGCCGGTG GCGCGACCTG
TACCGGGCGG CGATCGCCGA GCAGGCCGAG CAGAACCGCC GCGTCCTGGA TCACGCCTCC
ACGCCGCAGG CCCGTCAGCG GGCACAGGGC CGCCGTCTCC AGGCCGAGAA CCAGATACGG
CTGCTCAAGA ACGAGGACAC CGAGCAGCAG TTCAGTGACT TCTACACCTA CCGCTACTTC
GCCTCCGAGG GATTCCTCCC CGGCTACTCG TTCCCCCGGC TCCCGCTCGC CGCCTACATC
CCCGGCCGCA AGCAGCGTGG CAGCTACGTG CAGCGCCCCC GGTTCATCGC GATCGGCGAG
TTCGGTCCGG GTGCGTTGAT CTACCACGAG GGCCAGCGCT ACCAGGTGGC CAGCATCCAG
GTCCCGGCCG GAGAGTCGGG CGAGGTGGCA ACCGCCGAAG CCCGTATCTG TGGCGCTTGC
CGCTACTGGC ACGCCCGCGA GGCGGGCGTC GACCGATGCG AGGAGTGCGG TGCCGAACTG
GGGGGCTCCC TGGGCGGCCT CATGCACCTG CAGACCGTGC ACACCATCCG CCGCGAGCGC
ATCTCCTCCG ACGAGGAGGA GCGACGCCGG GCCGGGTTCG AGCTCCTCAC CAGCTACCGC
TTCAGCACCC ACGGCACCCG CTCGGGCCGG ATGCAGGCCG ATGTGGTCAG AGACGGCCGC
TCGCTGGCCG AACTCGTGTA CGGCGACACC GCCACGGTCC GCGTCATCAA CCGGGGCAAC
AAGGGACGTC GTAACCGTAA CGACGTCGGC TTCTGGCTGG ACCCGGTCCG TGGTCGCTGG
CTCAGCGAGT CCAAGGCCTC CGAACGCACT CCCGAGGATC AGGGCCTGAC ATCGGCCGAG
GACGCGCAAC GTGTGTTGAA GGTCGTCCCG TTCGTCGAGG ACAGCAAGAA CATCTGTGTG
GTCCGCCTCT CCGACCAGGT ATCGGAGACG GAGGCCACCA CCCTCCGCTA CGCGCTGGAG
CGCGGCATCG AGGCCGAGTT CCAGCTTGAG GACGCCGAGT TGACGAGCGA GGCGCTGCCC
GACCCGCTCC GGCGGGCGCG GATGCTGTTC ATCGAGAGCG CCGAGGGCGG GGCGGGCGTG
CTCCGCAGGC TCCACGACGA GCACGACGCG CTGCAGCGGG TCGCCCGGAG GGCGCTGAAG
ATCATCCACG TTGATCCGGA CACCGGTGAG GACTACGGCC GCGCTCCCGG CGCTCGCGAG
CGGTGCGAGC GCGGCTGCTA CGACTGCCTG CTCTCCTACG CCAACCAGCT GTGGCACGAG
CAGATCGACC GGCTCGCGGT CGTGGAGCGG TTGCGCGAGC TGGCCTCCGC CGTCACCAAG
CCGACCGGCG GCCACACGTC CGCGGAAGAG CACATGGGCA GCCTCAGGGA CTCGTCCGGC
AGCGAGTTGG AGCGCCGGTT CGTCGAATTC CTCCGGGAGG GTGACTACCG CCTGCCCGAC
GGCGCCCAGG AGATCCTCGC CGACGCACGG GCGAAGCCGG ACTTCGTCTA TCGCACGCAG
GCCGGGAACG TCGCGGTCTT CGTCGACGGG CCCCACCACG ACGCCGCGCA CGTCAACGAG
CGCGACATGC AGGCCGAGGA CAGGCTGATG GACCTGGGCT GGCTGGTCAT CAGATTCCGA
TACGACGAGG AGTGGGACGA GATCGTGCGC AGCTACCCGA GCGTCTTCGG CACCGGACGG
GCCACCCGAT GA
|
|---|
| Protein sequence | MDVFQVHERL IADYDRFTTS LVHVRDDRIA RHLEDEREAR VRWPHPWVSL NPSFAGGGTV
SELVGAGLLH PMCERLFRIK TDGNDPGDRS LSLHRHQREA VEAARDGGSY VLTTGTGSGK
SLAYMVPIVD SVLRDPDPGR VKAIVVYPMN ALANSQLHEL ERFLEWGLPK DARPVSFDRY
TGQESEEKRN RILARKPDIL LTNYVMLEYL LTRPDERRDL IGAAQGLRFL VLDELHTYRG
RQGADVALLV RRLRDACDTP DLQCVGTSAT MATTKTFAEA QTVVAEVATR LFGTDVSPDR
VIGETLIRAT SDKAPTSAEL VISMAKAGSG RSYAELADDA LAIWIESEFG LEAEPGSDRL
VRRRPEKVAE TAKALTDVTG RPEVECAGAI ERLLQEGARA PHPETGRPLF AFRLHQFLSK
GDTTYVSLEP EAERHITSQY QVSVPGQREK ILLPLAFCRE CGQDYLVVAR EKGERYSARQ
EANVPGGDTV NGYLYISTEH PWPVDPVGEG RLPDSWLEPA ADGRTQVRPS LSDRLPREVW
LGPGGSEVPA GEGIHAWYVP SPFRFCLRCR VSYEQSRGRD FAKLATFATE GRSSAVSIIS
ASIVRSLREQ NEKGRLDDEA RKLLTFVDNR QDASLQAGHL NDFVQVTQLR GALYRAARAA
GEEGLRHDEV AQRVAKVMNL PLEAFARNPE VKFGQKEAVL KAFRGVLSYL IYLDLERGWR
ITMPNLEQTG LLRFDYVALD EIAADTEHWE RTHPALRTDE PAHRAELARL VLDEMRRALA
VDVDELTPEG FERIQKQSDQ NLTGAWALAE GGNRDSARTV FARSGRPGES RDRVNFTGRS
GLGSYLRRAG MFPNYGHRLT VDDAQEIIVD LLWVLEKYGL LTEVQEGRDG TKGYRLRSSE
LIWRAGDGTT GAPDPIRKTV DPEVGTRVST FFRDLYAEVA SGLAGIHAAE HTAQVRAEDR
QERERLFRDG ELPLLYCSPT MELGVDIATL NSVAMRNVPP TPANYAQRSG RAGRSGQPAL
ITTYCSTGSS HDQYYFRRSR LMVAGSVQPP RLDLTNEDLI LSHVHAIWLA ETGAQLHSQM
ADVIDISRLD RLPLHEHIRI QLADDSARRR AVPRARRMLD TIAKTERLDR TTWWDEGWVE
RKVLGAAEKF DAACGRWRDL YRAAIAEQAE QNRRVLDHAS TPQARQRAQG RRLQAENQIR
LLKNEDTEQQ FSDFYTYRYF ASEGFLPGYS FPRLPLAAYI PGRKQRGSYV QRPRFIAIGE
FGPGALIYHE GQRYQVASIQ VPAGESGEVA TAEARICGAC RYWHAREAGV DRCEECGAEL
GGSLGGLMHL QTVHTIRRER ISSDEEERRR AGFELLTSYR FSTHGTRSGR MQADVVRDGR
SLAELVYGDT ATVRVINRGN KGRRNRNDVG FWLDPVRGRW LSESKASERT PEDQGLTSAE
DAQRVLKVVP FVEDSKNICV VRLSDQVSET EATTLRYALE RGIEAEFQLE DAELTSEALP
DPLRRARMLF IESAEGGAGV LRRLHDEHDA LQRVARRALK IIHVDPDTGE DYGRAPGARE
RCERGCYDCL LSYANQLWHE QIDRLAVVER LRELASAVTK PTGGHTSAEE HMGSLRDSSG
SELERRFVEF LREGDYRLPD GAQEILADAR AKPDFVYRTQ AGNVAVFVDG PHHDAAHVNE
RDMQAEDRLM DLGWLVIRFR YDEEWDEIVR SYPSVFGTGR ATR
|
|---|
| |