Gene Sros_7648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7648 
Symbol 
ID8670969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8439892 
End bp8440770 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content72% 
IMG OID 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_003343064 
Protein GI271968868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTAACG CCTCGGATCC CCGCCTCGCC GACTACGCCA ACCTGCGCGA CGTCGAACTG 
CGCAAGAGCA TGGAGGCCGA GCACGGCCTC TTCATCGCCG AGGGGGAGAA GGTGATCCGC
CGGGCCGTCG CGGCCGGTTA CCCGGTGCGT TCGGTGCTGC TGACCCGGCG CTGGGCCGAC
CCGCTCGCCG ATCTGCTCGA CGGGCTCGGC GACCGGGTGT ACGTGGTGGA CGACGACGTC
ATGGAGGGGA TCGCCGGCTT CCCGGTGCAC CGGGGCGCGC TGGCCGCGAT GGAGCGCCGG
GAACTGCCCC CGGTGGACGA GGTCCTGCGC GGGGCCTCTC ACGCGACCGC CGGCGCCGTG
GACGAGGGCG GGCCCGTCCG GCCGCCCCGC CGCCTCCTCG TCCTGGAGGA CCTCGTCGAC
CACGGCAACG TCGGCGCGAT CTTCCGATGC GCCGCCGCCC TCGGGGTGGA CGGGATCATC
CTCTCGCCGC GGTGCGCCGA CCCCCTCTAC AGAAGATCGG TGAAGGTGTC GATGGGGGCG
GTCTTCGCGA TCCCCTATGC CCGGATGGGC AACTGGTACG ACGGGTTGGA GGAGATCCGG
GCGGCGGGTT TCCAGACGCT GGCGCTGACT CCCGACCAGG ACGCCACCCC TATGGACACC
GTCGAGATGC GTGAGCGGGT GGCGTTGCTG CTCGGCTCGG AGGGGGACGG CCTGTCCTCG
CGCTGGTTGC GGGAGGCCGA CGAACAGGTG TGCATCCCGA TGAGCCCCAC GGCGATGGCG
TCGGGCGTGG ACTCGCTCAA CGTGGTGGCC GCCGCCGCCA TCGCCTGCCA CGGGCTCATG
CGCGGCACCG CCGTCCCTCA GGGCCGGCGG CAGCCGTAG
 
Protein sequence
MFNASDPRLA DYANLRDVEL RKSMEAEHGL FIAEGEKVIR RAVAAGYPVR SVLLTRRWAD 
PLADLLDGLG DRVYVVDDDV MEGIAGFPVH RGALAAMERR ELPPVDEVLR GASHATAGAV
DEGGPVRPPR RLLVLEDLVD HGNVGAIFRC AAALGVDGII LSPRCADPLY RRSVKVSMGA
VFAIPYARMG NWYDGLEEIR AAGFQTLALT PDQDATPMDT VEMRERVALL LGSEGDGLSS
RWLREADEQV CIPMSPTAMA SGVDSLNVVA AAAIACHGLM RGTAVPQGRR QP