Gene Sros_7638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7638 
Symbol 
ID8670959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8431899 
End bp8433002 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC-type amino acid transport system permease component-like protein 
Protein accessionYP_003343055 
Protein GI271968859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.16745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC AGGCATCCGG CACGAGGATG ACGGACGGGC TCGCCCCCGG CGACAACGCC 
TCCGAGCCCG CCCGCCCCCT GAGCACGCGC GGATACCTCA GCGGCGCGGC GGTCCTGGCC
CTGCTCACCG TCGTGGTGTG CTACGCGTTC GCCGGCGCGG CCCTGCCCGC GGGGCAACCG
CTCCGCATCG TCCTCGGGAT CGTGCTGCCG GCGGTGATCG TGGGCGGCCC GCTGCTGGCC
GCCTACCGCG GCAGCAGCCT GTCGGACCAG GAATGGGCGG CCGGCCGGTA CGTCGCGGCA
CGCGTGGCCG CCGCGCGGTC GAGGAACGCG TCGATCGCCT CGCTGGGACT GACCGGCTTC
ATCGCGATCG TCTCGCTGGC CGGCCTGCTC GTCTTCACCA ACGACGGCGC CGTGCAGAAG
ACGTTCCTCA ACGGCGAGTT CATGGTCAAG AGCGCCGCGG ACATCGGCAA GGCGCTGCTG
ATCAACGTGG AGATCGCCAT CGGCGCGCAG ATCCTCGCGA TGGTGTTCGG GCTCCTCCTC
GCCATCGGCA GGCTGCTGCC CGGCAAGGGG TTCTGGCCCG TACGGGCGCT CTGCATCGCC
TACATCGACG TCTTCCGCGG CATCCCGTCC GTGGTGCTGA TCTACCTCGT GTGCTTCGGG
CTCCCGCTCA CCGAGGTGCC GATCCTCAGC GAGGGCGACC CGATCCTCTA CGCGGTCGTG
GCGCTGTCGC TGACCTACAG CGCCTACAAC GCCGAGCTCT ACCGCGCGGG CATCGAGTCC
ATCAACAAGA GCCAGACCTC CGCGGCGCTC TCCATGGGCC TGTCCCAGCC CGACGTCCTC
AGGTTCGTGA TCCTGCCGCA GATGTCGCGG AACATCGCGG CGCCGATGCT GAGCACGTTC
ATCGGGCTGC AGAAGGACAC CGCACTCGTG ATCGTCGTCG GCATCATCGA CGCCTTCAGC
CAGGCGAAGA TCTACTCGGC CAACGACTTC AACCTCTCCG CGGTGACGGC CGTGTGCTTC
CTGTTCGTCC TCATCACGAT CCCGCAGACC CGTCTCGTCG ACTACCTGCT CGCACGGTCG
AGCACGAGGA AGAAGGGGGT CTGA
 
Protein sequence
MNVQASGTRM TDGLAPGDNA SEPARPLSTR GYLSGAAVLA LLTVVVCYAF AGAALPAGQP 
LRIVLGIVLP AVIVGGPLLA AYRGSSLSDQ EWAAGRYVAA RVAAARSRNA SIASLGLTGF
IAIVSLAGLL VFTNDGAVQK TFLNGEFMVK SAADIGKALL INVEIAIGAQ ILAMVFGLLL
AIGRLLPGKG FWPVRALCIA YIDVFRGIPS VVLIYLVCFG LPLTEVPILS EGDPILYAVV
ALSLTYSAYN AELYRAGIES INKSQTSAAL SMGLSQPDVL RFVILPQMSR NIAAPMLSTF
IGLQKDTALV IVVGIIDAFS QAKIYSANDF NLSAVTAVCF LFVLITIPQT RLVDYLLARS
STRKKGV