Gene Sros_7609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7609 
Symbol 
ID8670930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8402661 
End bp8403338 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content72% 
IMG OID 
Productprotocatechuate 3,4-dioxygenase, beta subunit 
Protein accessionYP_003343026 
Protein GI271968830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGACG ACCCGCACCC GCGCTACCTC ACCCCCTCCT ACCGCAGCAC CGTGCTGCGC 
GCGCCCGCGC AGCCGCTGGT GCGGCCCGCC CTCGACCCCG AGGCGGCCGA GCTGCTCGAC
CCGGTCTACG GCCACCAGCC GGTCGGGCCC CTGGACCACG ACCTGACCAG GCAGCACGCG
GGCGAGCCGA TCGGCGAGCG CATCATCGTC ACCGGACGGG TCCTCGACAG CCGGGGCCGG
GCCGTACCGG ACACGCTGGT GGAGATCTGG CAGGCCAACG CCACCGGCAG GTACGCCCAT
CCGGTGGACC GGCACCCCGC CCCGCTGGAT CCCAACTTCA CCGGCTCCGG CCGTTGCCTG
ACCGACGCCG ACGGCCGCTA CCGGTTCGTC ACGATCAAGC CGGGCGCCTA CCCCTGGCGC
AACCATCCCA ACGCCTGGCG GCCGGCGCAC ATCCACTTCT CGGTGTTCGG CACCGCCTTC
ACCCAGCGGC TGATCACCCA GATGTACTTC CCCGGCGACC CGCTGTTCGC CCATGACCCG
ATCTTCCAGT CGGTGCCCCG GCCGGAGGAC CGCGAGCGGC TCGTCTGCGC CTTCGACCTG
GACACCACCG AGCCCGAATG GGCGCTCGGC TACCGGTGGG ACGTCGTGCT GGGCGCGACC
CCCTTCGAGG AGGACTGA
 
Protein sequence
MTDDPHPRYL TPSYRSTVLR APAQPLVRPA LDPEAAELLD PVYGHQPVGP LDHDLTRQHA 
GEPIGERIIV TGRVLDSRGR AVPDTLVEIW QANATGRYAH PVDRHPAPLD PNFTGSGRCL
TDADGRYRFV TIKPGAYPWR NHPNAWRPAH IHFSVFGTAF TQRLITQMYF PGDPLFAHDP
IFQSVPRPED RERLVCAFDL DTTEPEWALG YRWDVVLGAT PFEED