| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7607 |
|---|
| Symbol | |
|---|
| ID | 8670928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 8400395 |
|---|
| End bp | 8402152 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
|---|
| Protein accession | YP_003343024 |
|---|
| Protein GI | 271968828 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGTG AGAAGCTCGC CATCGTCGGC GTGGCCACCC TGGCGGCTCT TGCCGCTCCG
GCGGTGGCGC ACGCCTCCCC CGACACGTCG GTGACGGTGA CCGTGATGGG CACCTCCGAC
CTGCACGGCA ACACCCTGAA CTGGGACTAC TTCAAGAACA CCGAGTTCAC CGACAGTAAG
GGCAACGACG TCGGCCTGGC CAAGGTCTCG ACGCTGGTCA ACAAGATCCG CGCCGAGCGC
GGCGCGGACC GGACCCTGCT GTTCGACTCC GGCGACACCA TCCAGGGCAC GCCGCTGGCC
TACTACTACG CCAAGATGGA GCCGGTCGAC GAGACGGGCG GGCTCCACCC GATGGCCCGC
GCGATGAACG CCATCGGGTA CGACGCGGTG ACCCTGGGCA ATCACGAGTT CAACTACGGC
CTGCCGCTGC TGGCCACGTG GGTGCGGCAG ATGAAGGCCC CGGTGCTCGG CGCCAACGCC
GTTCACGCCA GGTCTGGCCT GCCCGCCTAC CGGCCGTTCA CCATCAAGAC GATGCGGATC
AAGGGCGAGA AGCCGGTCCG GGTGGGCGTG CTCGGCCTGA CCAACCCGGG CGTGGCGATC
TGGGACAAGG CCAACGTCGA GGGCAGGCTG CGCTTCACCG ACCTGGTCGA CAGTGCCAAG
AAGTGGGTGC CGGTCATCCG CGGCCTCGGC GCGGACGTGG TCGTGGTCAC CGCGCACGCG
GGCGACAGCG GGATGTCCTC CTACGGCGGC GACCTGCCCG TCGAGAACGC CTCGGCCATG
GTCGCCGAGG AGGTCCCCGG CGTGGACGCG GTGCTGTTCG GGCACGCGCA CAACGAGGTG
GCCCAGAAGT TCGTCACCAA CAAGGCCACC GGCCGGCAGG TGCTGCTCAC CGAGCCCGGC
AAGTGGGGCC AGCGGCTGAG CGTGATCGAC TTCCAGCTCA CCAAGAAGCG CGGCAAGTGG
GCGGTCACCG GGAAGTCCTC CACCACGCTG AACACCAACA CGGTGGACGA GGACCCGAAG
ATCGTCGCGC TCATGAAGGA ACAGCACGAC ACCACGGTCA AGTACGTCAA CACGGTGGTG
GCCCAGTCGA AGGAGCAGCT GTCGGCGGCC GAGTCCCCGT ACAAGGACAC CCCGATCCTG
GACTACATCC AGAAGGTCCA GACCGAGACG GTGCGGAAGG CCCTGGAGGG TACGGCCGAC
GCCTCGCTGC CGGTGCTGTC GATCTCCGCG CCGTTCAGCA GGAGCGCCAC CTTCCCCGCC
GGGCCGGTGA GCGTGCGTGA CATGGCGGGC CTGTACATCT ACGACAACAC GCTGATGGCG
GTGAAGCTCA CCGGGGCCCA GCTCAAGGAC TACCTGGAGT ACTCGGCCCG GTACTACAAC
CAGCTCGCGC CGGACGCCCC GGTCGACCTG GCCGCGCTGA CCAACGCCAA CGGCACCCCC
GACTACAACT ACGACCAGCT CTCCGGCGTC ACCTACGACG TGGACGTCGC CCAGCCGGTC
GGCCGGCGGA TCGCCGGACT GTCCCACCAG GGGCAGCCGG TCGCCGCCGA CCAGCAGTTC
GTGGTCGCGA TCAACAACTA CCGCCAGTCG GGCGGCGGCG GCTTCCCGCA CGTCACGACC
GCTCCGGTGG TCTACAACGC GCAGGTGGAG ATCCGCCAGG CGCTGATCGA CTACGCGACG
GCGACCGGGG TCATCGACCC GGCCGGGTTC GCCGAGGCCG GCTGGAAGCT GACCCGGGAC
GGCAAGCCGC TCTTCTGA
|
|---|
| Protein sequence | MHSEKLAIVG VATLAALAAP AVAHASPDTS VTVTVMGTSD LHGNTLNWDY FKNTEFTDSK
GNDVGLAKVS TLVNKIRAER GADRTLLFDS GDTIQGTPLA YYYAKMEPVD ETGGLHPMAR
AMNAIGYDAV TLGNHEFNYG LPLLATWVRQ MKAPVLGANA VHARSGLPAY RPFTIKTMRI
KGEKPVRVGV LGLTNPGVAI WDKANVEGRL RFTDLVDSAK KWVPVIRGLG ADVVVVTAHA
GDSGMSSYGG DLPVENASAM VAEEVPGVDA VLFGHAHNEV AQKFVTNKAT GRQVLLTEPG
KWGQRLSVID FQLTKKRGKW AVTGKSSTTL NTNTVDEDPK IVALMKEQHD TTVKYVNTVV
AQSKEQLSAA ESPYKDTPIL DYIQKVQTET VRKALEGTAD ASLPVLSISA PFSRSATFPA
GPVSVRDMAG LYIYDNTLMA VKLTGAQLKD YLEYSARYYN QLAPDAPVDL AALTNANGTP
DYNYDQLSGV TYDVDVAQPV GRRIAGLSHQ GQPVAADQQF VVAINNYRQS GGGGFPHVTT
APVVYNAQVE IRQALIDYAT ATGVIDPAGF AEAGWKLTRD GKPLF
|
|---|
| |