| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7588 |
|---|
| Symbol | |
|---|
| ID | 8670909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 8380894 |
|---|
| End bp | 8381640 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003343005 |
|---|
| Protein GI | 271968809 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.325809 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTCA GAGCACCGCA CCTGGCCGGG GCCGCGCTGG CGCTCGCCGG CTGGCAGGTC
GCGGGCGCCT TCCACCCCGA CTTCACCTCC TCGCCGACCC TGGTCGCGGC CGAGCTCGTA
CGGCTGGCAC ACGACGGCGA CCTGATCTCC CTCGTCGCCG GGACGGTCGC CACCCTGCTG
GGCGGGTGGG TCCTGGCGGC GGTGCTCGGC GTGCTGACCG GTTTCCTCAT CGGCCGCCAC
CACCTCCTGG CGGTGGCGCT GGAGCCGTAC CTCGTGGCGC TCTACTCCGT GCCGCTGATC
GCCCTCGTCC CCCTGATGAT CATCTGGTTC GGCATCGGCC AGGGCTTCCT GCTCGCCACG
ATCGTGCTGT CCACCGGGAT CATGCTGGTC TTCCCCGCCG CCACCGGCAC CCGGGAGAGC
GTGCGCGCCT ACGGCGAGCT GGCCCGCGCC TACCGGGTCA CCGGACACCG CCTCCTGCTC
AAGGTCGTGC TGCCGGGGGC TCTGCCGTAC ATCGCGGCGG GGCTGCGGAT CAGCGTGCAG
CGCGCGCTGA TGGCAGTCGT CGTCGGCCAG TTCCTCGTGG GCCACCCCGG CCTCGGCACC
CTGCTCAGCG ATGCCCGCGC CCGGCTGGAC GCCGACGAGG TGTTCGCCGT CGCGCTCGTC
TCGCTGGCCG TCGGAGCCCT TCTCACCGCA CTGGTCGGCT GGGCCGGCCG CAGACTGTCC
GCCTGGCGCC CGGAGGTGAC TGCGTGA
|
|---|
| Protein sequence | MTVRAPHLAG AALALAGWQV AGAFHPDFTS SPTLVAAELV RLAHDGDLIS LVAGTVATLL
GGWVLAAVLG VLTGFLIGRH HLLAVALEPY LVALYSVPLI ALVPLMIIWF GIGQGFLLAT
IVLSTGIMLV FPAATGTRES VRAYGELARA YRVTGHRLLL KVVLPGALPY IAAGLRISVQ
RALMAVVVGQ FLVGHPGLGT LLSDARARLD ADEVFAVALV SLAVGALLTA LVGWAGRRLS
AWRPEVTA
|
|---|
| |