Gene Sros_7508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7508 
Symbol 
ID8670829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8305465 
End bp8306619 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content68% 
IMG OID 
Productbranched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative 
Protein accessionYP_003342933 
Protein GI271968737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTT CCCTCACCGG TGCCGTGGCG GTGGCCGCCC TGGCCCTCTC CGCCGCCGCC 
TGCTCCGACG CCGGCGGCTC GACCGACGGG CCGATCAAGG TCGGTTCCAT CAACGGCGTC
ACCGGCCTGT TCCAGACGCC CGAGGTCCCG CAGGCGGTCA AGGCCGTCTT CGAGGAGGTC
AACAAGGCCG GTGGCATCAA CGGCCGCAAG ATCGAGCTCA TCAGCAAGGA CGACGCGATG
AACCCGCAGC GGTCCACCGA GGCCGCCCTG GAGCTGCTGG AGTCCGAGAG CGTCGTGGCG
CTGGTCGGCT CCTCCAGCGC GGTCGACTGC GGGCTCAACC GCGCGACCTA CGGCAACAGC
GGGATCGTCT CCATCCCGGC CGTCGGCGTG GACCCCGCCT GCTTCACCAG CCCCAACATC
GCCCCCGTCA ACCCGGGCCC GTTCAAGCTG CTGACGGCGA TGCTCTACTA CGCCTCCGAG
ACGCTGAAGC ACGACAAGGT CTGCATGTAC TACACCGTGC TGCCGGGCAG CGGCGGCGGC
ATCGACGCCG CCATCAAGGA GTGGAGCGAC ATCACCGGCA AGCAGCTCGC GGTCAAGGAC
ACCTCCGTCG GCGAGGGCGA CCCGACCCCC TACCTGGTGG CGGCCAAGGC GGCCGGCTGC
CAGGCCGTCC TCTACAACGC GACGGTCGGC CCGTGGTTCG CCCAGGCGCA GACGCAGGGC
CTGCAGGACG TCGACTTCAT CATGGGCGCC AACAGCTACA CCGACGCCAA CGCCGAGGTC
ATCCCCGAGG GGATGAACGC CTACGCCGGG ACCGAGTGGC AGCCGTACAC CGACGAGACC
CTGCCGGGCA ACGAGCGCTG GGCGAAGGTC GTCGACGACA ACAAGATCCA GAAGACGGCG
TTCAGCCAGG GCGCCGTGAT GGCGGCCGAC GTGTTCGTCC AGGTACTCAA GACGATCAAG
GGTGACGTCA CCCGCGAGTC GGTGACCGAG GCCTTCAAGA AGATGCAGCC GATCCAGTAC
CCGATGGTGG GCACCCCGTG GGTCTTCGGC CCCGGCGAGG CGCACAGCCC GATCCAGGGC
AGCCGGTTCG TCAAGGTCGA GAACCGCAAG TGGAAGGTTC TCCCCGAGGG CTTCATCGTC
CCGGGCAAGA ACTGA
 
Protein sequence
MKRSLTGAVA VAALALSAAA CSDAGGSTDG PIKVGSINGV TGLFQTPEVP QAVKAVFEEV 
NKAGGINGRK IELISKDDAM NPQRSTEAAL ELLESESVVA LVGSSSAVDC GLNRATYGNS
GIVSIPAVGV DPACFTSPNI APVNPGPFKL LTAMLYYASE TLKHDKVCMY YTVLPGSGGG
IDAAIKEWSD ITGKQLAVKD TSVGEGDPTP YLVAAKAAGC QAVLYNATVG PWFAQAQTQG
LQDVDFIMGA NSYTDANAEV IPEGMNAYAG TEWQPYTDET LPGNERWAKV VDDNKIQKTA
FSQGAVMAAD VFVQVLKTIK GDVTRESVTE AFKKMQPIQY PMVGTPWVFG PGEAHSPIQG
SRFVKVENRK WKVLPEGFIV PGKN