| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7499 |
|---|
| Symbol | |
|---|
| ID | 8670820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 8295998 |
|---|
| End bp | 8297485 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_003342924 |
|---|
| Protein GI | 271968728 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTCC GTTCCACCCC CCAATGGAAG GCCGCCATGA CCGTCAACGA ATCGGCAGCC
GCCCCGGCCG CGCTGTCACG CCGTCGCATC GGCGTGCCGG ACATCGTGTT CTTCGTGGTC
GCCGCGTCTT CTCCGCTCAC CGTGGCCGCG GGCGGCACCC CGCAGAACTT CGCCACCACC
GGTGTTCTCG GCGTGCCGAT GATGTTCCTC ATCCTGGCCG TCGTGCTCGC GGTCTTCTCC
GCCGGATACG CCGCGATGAG CCGCCACATC TCCAACGCCG GCGCCTTTTA CGCCTACATC
GCGCACGGCC TGGGCCGCGT CCCCGGCGTC GGCGCCGCCT TCGTCGCGCT GGTCGCCTAC
AACGCCATGC AGGTCGGCCT GTACGGCCTG CTCGGCTTCA GCGCCGCCGG GTTCCTGTCG
GCGACCTTCG GGGTGGACCT GCCCTGGTGG GTGGTCTCGC TGGCCTTCAT GGCGCTCATC
GCCCTCCTCG GCTACCGCCG GATCGACCTC AACGCCAAGG TGCTCGCCGT CCTGCTGGTC
TGCGAGGGCC TGCTCGTCCT GGTCTTCGAC GTCTCCCAGA TCGCCACGGC CCCGCAGGGC
CTGTCGCTGG AGCCGTTCGG CTGGGACGCG CTGACCACGG GCGCGGTGGG GGCCGCCTTC
CTGTGGACGA TGGCCGCCTT CATGGGCTTC GAGTCCGGTG CGATCTACAG CGAGGAGTGC
CGCGACCCGC GCAGGACCGT CAGCCGGGCC ACCTACATCT CCGTCGCCGT GATCGGCGTC
TTCTACGCCT TCACCGCCTG GGCCACCGCG ATGGGCGCGG GGGTGGACGA CGTCGTCGCC
GCGTCCCGCG AGCACGGGCC CGACCTGATC TTCGTGCTCG GCGAGCGCAC GCTCGGCTCG
GGCTTCTCCA CCCTCGGCCA GGTCTTCCTG ATCACGGCGG TCTTCGCCGC CACGCTCTCC
TTCCACAACG CGGTCGCCCG ATACTTCTTC GCGCTCGGCC GCGAGGGCGT GCTCCCCGCG
AAGCTGGGCT CCTCGCACCC CCGGCACGGC TCGCCGTACG TGGGGTCGAT CGGCCAGACC
GTCTTCGCGG CGGTCGTCGT GCTCGGGTTC GGGCTGCTCG GCGGGGACCC GATGGGCACG
CTGTTCAACT GGTTCACCAA CCTGGGCGCG CTCGGGGTGA TCCTGCTGCT GGTGTCCACC
TCGGTCGCGG TGATCGGGTT CTTCCGCCGC CAGGCGCGGG GCGAGGGCGT CTGGAGCCGG
GTGGTCGCCC CGGCGCTGTC CGGTCTCGCG CTGCTGGCCA TCCTGTACGT CGCGTTCACC
AACTTCTCCG CGCTGCTCGG CACCCCGCCG GACTCGGCGC TCAACTGGGC GCTCCCGGCC
GTGGTGGTGC TGGTCGGCGT GGTCGGCCTC GGCTACGGCG CCTACCTGAG GTCCGCCGAC
CCGGCGGCGT ACGCCCGGAT CGGGCAGGGC GCGCCGCCGC AGGACTGA
|
|---|
| Protein sequence | MRFRSTPQWK AAMTVNESAA APAALSRRRI GVPDIVFFVV AASSPLTVAA GGTPQNFATT
GVLGVPMMFL ILAVVLAVFS AGYAAMSRHI SNAGAFYAYI AHGLGRVPGV GAAFVALVAY
NAMQVGLYGL LGFSAAGFLS ATFGVDLPWW VVSLAFMALI ALLGYRRIDL NAKVLAVLLV
CEGLLVLVFD VSQIATAPQG LSLEPFGWDA LTTGAVGAAF LWTMAAFMGF ESGAIYSEEC
RDPRRTVSRA TYISVAVIGV FYAFTAWATA MGAGVDDVVA ASREHGPDLI FVLGERTLGS
GFSTLGQVFL ITAVFAATLS FHNAVARYFF ALGREGVLPA KLGSSHPRHG SPYVGSIGQT
VFAAVVVLGF GLLGGDPMGT LFNWFTNLGA LGVILLLVST SVAVIGFFRR QARGEGVWSR
VVAPALSGLA LLAILYVAFT NFSALLGTPP DSALNWALPA VVVLVGVVGL GYGAYLRSAD
PAAYARIGQG APPQD
|
|---|
| |