| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7428 |
|---|
| Symbol | |
|---|
| ID | 8670749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 8195270 |
|---|
| End bp | 8196490 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | antibiotic efflux protein |
|---|
| Protein accession | YP_003342854 |
|---|
| Protein GI | 271968658 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0620213 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGG ACATGACACA GGCCGACGCC GAGCCACGCT TGTCCGCGGC CTACTGGCGG
TTGTGGTGGG CGACGGGCAT CAACAGCATC GGTGACGGGG CATTCGCCGC GGCTGTCCCG
CTGCTGGCCG TCACGATCAC GCACGACCCG CGGCTCGTGT CGGTCGTATC CGCGGCGACG
TATCTGCCCT GGCTGCTGCT GTCGCTCCCC GTCGGTGCGC TCGTCGACCG GCACGACCGC
GCCGGCCTCA TGTGGCGCTC GCAGGCGATC CAGGCGGTGA TCGTCAGCGG CATCGCCATC
CTTGCCGCGT TCGGCCACAT CGGCATCCCG GTGCTCGCGG TCATGGCCTT CGGGCTGGGG
GTGTGCGAGA TCGTTTTCGC CGGCGCGGCG CATGCGATCT TGCCGGACAT CGTCGCCAGG
CCCCTGCTGC ACAAGGCGAA CGGCCATCAG CAGACGATCG CAACGATCGG CTACCAGTTC
CTGGGACCAC CGCTCGGCAG CCTGCTGTTC GCGGTCGCCG TGGCGTCGCC GTTCGGGATG
GACGCCGCCT CCTTCGCCCT GTCCGCCGCA CTGCTGGCGA CATTGCCCAG GCACAGGCAC
CGGCGGATCG AGCACCCACC GATGCGTACG GCGATCGCGG AGGGCCTGCG CCGGCTGGCC
CGTCACCGGC TGCTGCGCAC CCTCGCGGTC CTGCTCGGGG TCAACACCTT CTGCGGCCAA
CTGGGCAACG TCACACTCGT CCTGCTGGCG ACCCGGACGC TGCACCTCGA CACGCGCGGT
TACGGCCTGC TGCTCGCCGG CGCCGCGGTC GGCAGCCTGC TCGGCGGCCT GGTCAGTGCG
CGCGTCGTCA ACAGGGTCGG CGCGCTTCCC GCGCTCCTCA CCGCGCTCGC CACGAACGTC
GTCGTCTTCG TCGGGATCGG GCTGAGCCCG AACGCGATCG TGCTCGGCGC CCTGCTGGCC
GTCAACGGCT TCGTCATCAC GCTGTGGACC ATCGTGACCG TCAGCCTCCG GCAGCAGGCC
GTACCGTCCG AGATGCTCGG CCGGGTCAAC AGCGTCTACA AGATGATCGG CTGGGGACTG
ATCCCGCTCG GGGGACTGGC CGGCGGACTG GTGGCGCACA CGTTCGGGTT GCGCGCGCCG
TACCCCGTCG CGGGTGTGCT GCGAGGGGTC GCCTTGCTGA TCGCGATGCC CGTACTGATC
CGCGCCATGC GTGACCAGTG A
|
|---|
| Protein sequence | MKQDMTQADA EPRLSAAYWR LWWATGINSI GDGAFAAAVP LLAVTITHDP RLVSVVSAAT
YLPWLLLSLP VGALVDRHDR AGLMWRSQAI QAVIVSGIAI LAAFGHIGIP VLAVMAFGLG
VCEIVFAGAA HAILPDIVAR PLLHKANGHQ QTIATIGYQF LGPPLGSLLF AVAVASPFGM
DAASFALSAA LLATLPRHRH RRIEHPPMRT AIAEGLRRLA RHRLLRTLAV LLGVNTFCGQ
LGNVTLVLLA TRTLHLDTRG YGLLLAGAAV GSLLGGLVSA RVVNRVGALP ALLTALATNV
VVFVGIGLSP NAIVLGALLA VNGFVITLWT IVTVSLRQQA VPSEMLGRVN SVYKMIGWGL
IPLGGLAGGL VAHTFGLRAP YPVAGVLRGV ALLIAMPVLI RAMRDQ
|
|---|
| |