Gene Sros_7413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7413 
Symbol 
ID8670734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8180693 
End bp8183593 
Gene Length2901 bp 
Protein Length966 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003342841 
Protein GI271968645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.38108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.924213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGTC ACTTTGAAGC ACTGGTCCCT CCGATCGTGC GGCCTTACGT GGGCTGGATC 
GTCGGAATGG ACTGGCCGGA GGGTGACGAG GAGCGCTGTT TCCAGCTGTC CGACGCCTAC
CGGGAGGTTG CCGAGGCGAT CGCGGTCCTG ATGGAGGACG GCGACGATGC CTGCCTCAAC
GTGTGCAAAT GCATGGACGG GGTGGCCTCC GACGCCTTCC AGGAATATTG GAAGACGTTC
ACCACGGTCG ACCCGCTCCT GTTGTGCCGC CTGAAGGAGG GGTGCGAGCG GGCAGGCAAA
CAGCTCAACG CGATGGGCCT GGAGATCGAG TACGCCAAAT ACATGATTCT GCTGTCCCTG
ATCCTGCTGG GGGTGCAGAT CACCTACTTC GTCGCCCTGG CCGCACCGTC GTTCGGGCAG
TCGCTGAGCC TGATACCCAT GGCGTGCAGG CTGACGCAGA TGACCGTGCG GCAGATCGCC
ATGCGGCTGT TGCGCAACAT CGCCTTGTTC ACCGGGGTGA TGGCCGGGAT GGACGGGCTC
ATCCAGACCA TACAGATAGC CAGTGGGCGG CGGGAGGATT GGGACTGGCT CAAGACAGGC
ATGTCAGTGG CCGGCGGCGC GCTGGCGGGA CTGATGTTCA CCGGATTGGG CGTGATGATC
AACAAGCTGG GCGGCGCGCG CATGGCGAGC GAGACGGTGG AGCGTCTGGC GATGACGGGA
AGGGAGAAGG CCGCCGCTTT CCTGGACAAC TCGGCGTGGG GCATGGCGAC GCAGAGCATG
ATGGCCAACA CCACCGCCGC CGTGCCGATG CTGGCGGCGA ACGGCCAGCT GAGCTGGGAG
ACGCTCGCCA AGAGCGCCAC CGCCGGCTTT CTGGGGGGCG CCGACGGCCA CCTCATCACC
CCGGCCGGCC GTCACGGTGT CAACGGCCTG CCCAGCCCGG TCGGCCACTT CCCGGAAATG
GGAAACCCCG CCGCCCCGGG CGGCCGTCAC GGCGCCGGTG GCGACCCGTC CCCGCCCATC
GCCCTCACCG GGAACGACCC GGTGCCCACC GGGCCCCGTC CGGCCACGGC TCCAGACGAT
CCCGCCAGGG TGACGCCACC CCATCCCGGC GCGGCCGACT CGACGGTCGT CGCCTCCCTC
CTCCGCGACA CCGCGCAACC CGATCCGGCG ACGCCGTCCC CCATCGGCTC AGAAGTGATC
GCCGGGGACA GGCCCGGACC TCCGCAGGGC CAGCCGACGC ACAGCGGAAC GGGCGTGCCC
GCCCGCCCGC CCGGAGACAC GCCGGCGCCG GCAGCTCCCC CGGCCCGCTC GAACACACAA
GCGGGCACCG CCGCGGCGCG TCCGGAAACC CCTGCCGCGG CGCGTCCGGA AACCCCTGCC
GCGGCCCGTC CGGAAACCCC TGCCGCCGCC CGCCCAGACA CTCTCGTCGC GGCGCGCCCG
GACACGGCCG CCCCTCGCAC CGATGCGCCG GCGGCCGCTG GAGCCCGTCC GGATACGCCC
TCGTTGACCG GGGAGCGGCT TGTGCCAGGT TACATAGATC GGATGCTCAA CCCGGATTCG
CCTTCTGGGC CACCGAAGGA TGCCACCTAC CTGTCCAACA ATTCCTCGGC CTCCGCACAG
CCACACGAGG CACCCGTCCC AGCGTCCCGC AATGCGTCAC AGGCCGGTTC GGCCCCGCAC
GATCCCGCCG CGTCCGGTGC CGCCCCGCCA CGGGGGCCCG GGGACGGGGC GCCTCCCCCT
GCGGACCCTC CCCGATCCTC GGATTCGGGT CACGGCGTGC CTCCGGACGA CAAGACAGCA
GACCTGCGTC CCAGGGGAGG CGACAAGACA GCAGACCTGC GTCCCAGGGA AGACGACAAG
ACAGCAGACC TGCGTCCCAG GGAAGACAAC AAGACAGCAG ACCTGCGCCC CAGGGAAGAC
GACGCCTCCG CATACCCCGC CCCCAAAGAC ATGGCAGACG ACGCCTCCGC TCCGAGAGGG
GCGGAGGGCT CTCACCCCGA TGGGGACGGC CCCGCGTCAC CCCGGGCGGC GGAGCTGCTC
GACGAATTGA CAGCGGCAAG GGAACGAGAG CCCCGCGTAC CGCCGTGGCT GGACCGTGGA
ATCCGCTCCG GCATCGCCGG AGAGCCCGTG CTGCTGGGCG GCCGCACCGG GGGGGCGGAC
GGCGTAAGGG GGACATGGTC CGTGCTGGTA GAGAAATGGA CGTTCAACGA CGGTTCCCAC
ATGATCCGCA AGGTCCTGGC GATCTCGCGA GAGGCAGACG CCGAGGCGCT GGCTGCGATA
GTGGGGACCG CCTTGGGGGC CGACGTCCCC GGAGTTTACC GGGCTGGCGA CACAGTCATC
TATCAGGAGT TCAAGGAGGG GCAGCACAGA GCGGTGTTAC CAGCGGAAGA GGTACCGCTG
AGACCCGAGT TGACGCGGAG CGGCATGCGC ATCAGCCTGC TCGACGTGCT GATCACCAAC
CCTGATCGCC ACTCCTTCAA CTGGTTGCTG AGTTCTGACC CGGAAATGCG AACGCCCACT
GGCCAGAGGA TCGGGGTCAT CGGCATCGAC CACAACCTCT CGTTCGAAGA CCCCCTGACC
TGGGCTCCCA AAGGGGAATT CGGAACTCAG TTCGTCCGTG GTGAGCTCAC CTCCGATGGT
GCCCACCAGC AATACGTCGG GAAGCCCAAT CCGCTCAGCC CGGAGGACAT CCAGGGCATC
AACAAGGTGC TCAAAAATCC CAGGATGAAA TGGGAGTTCG AACGACGGGG ACAGTTGGAC
TGGTACCACA ACATGCTCTC CCAGCTCGAT ATGATCGCGA GGAACGCGGT CGGGACGGAG
CCAAGGATGC CGATGCCCGC ACGAGTAGTG CCCAAGGTGA TCACACTCCA CGAGAGAAGC
CCTCTCGCCT CGGAGGAGTG A
 
Protein sequence
MDSHFEALVP PIVRPYVGWI VGMDWPEGDE ERCFQLSDAY REVAEAIAVL MEDGDDACLN 
VCKCMDGVAS DAFQEYWKTF TTVDPLLLCR LKEGCERAGK QLNAMGLEIE YAKYMILLSL
ILLGVQITYF VALAAPSFGQ SLSLIPMACR LTQMTVRQIA MRLLRNIALF TGVMAGMDGL
IQTIQIASGR REDWDWLKTG MSVAGGALAG LMFTGLGVMI NKLGGARMAS ETVERLAMTG
REKAAAFLDN SAWGMATQSM MANTTAAVPM LAANGQLSWE TLAKSATAGF LGGADGHLIT
PAGRHGVNGL PSPVGHFPEM GNPAAPGGRH GAGGDPSPPI ALTGNDPVPT GPRPATAPDD
PARVTPPHPG AADSTVVASL LRDTAQPDPA TPSPIGSEVI AGDRPGPPQG QPTHSGTGVP
ARPPGDTPAP AAPPARSNTQ AGTAAARPET PAAARPETPA AARPETPAAA RPDTLVAARP
DTAAPRTDAP AAAGARPDTP SLTGERLVPG YIDRMLNPDS PSGPPKDATY LSNNSSASAQ
PHEAPVPASR NASQAGSAPH DPAASGAAPP RGPGDGAPPP ADPPRSSDSG HGVPPDDKTA
DLRPRGGDKT ADLRPREDDK TADLRPREDN KTADLRPRED DASAYPAPKD MADDASAPRG
AEGSHPDGDG PASPRAAELL DELTAARERE PRVPPWLDRG IRSGIAGEPV LLGGRTGGAD
GVRGTWSVLV EKWTFNDGSH MIRKVLAISR EADAEALAAI VGTALGADVP GVYRAGDTVI
YQEFKEGQHR AVLPAEEVPL RPELTRSGMR ISLLDVLITN PDRHSFNWLL SSDPEMRTPT
GQRIGVIGID HNLSFEDPLT WAPKGEFGTQ FVRGELTSDG AHQQYVGKPN PLSPEDIQGI
NKVLKNPRMK WEFERRGQLD WYHNMLSQLD MIARNAVGTE PRMPMPARVV PKVITLHERS
PLASEE