| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7278 |
|---|
| Symbol | |
|---|
| ID | 8670592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 8028178 |
|---|
| End bp | 8029341 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | rod shape-determining protein |
|---|
| Protein accession | YP_003342708 |
|---|
| Protein GI | 271968512 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.161316 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGCG CGACGGCCGC GCCGCGGCGC GGGTCCTTCA CACGCAGGGC GGTGACGGCG
TCCTCGGCGG TGCGCCGGAT GGACGGGGTG CTGCTGGTCG CCGTCGCGGC GCTGGCGGTG
ATCGGCACCA TGCTGGTCTG GTCGTCCACC AGGACCTGGG CGCCCGGATC CACCGGCCTG
GTCAAGAAGC ACATCCTCAA CCTCTGCATC GGGACCGTGC TGACCGGCAT GGCGGCGATG
GTGGACCACC GGAGGCTGCG GGCCTACGCG CCCCTGGTGT ACGGCCTGTC CCTGCTCGGG
CTGTTCCTGG TGATCACGCC TCTGGGCTCC ACCGTGAACG GAGCCCACTC GTGGATCATG
GTGGGCGGGG GGTTCGCTTT CCAGCCGTCG GAGTTCGCCA AGCTCGGCCT GGTGCTGATG
CTCGCCATGC TGATGGCCCA GCCCGCCGCG GGCACCGACC GGCCGCGCGG CCTGGACGTC
GGGATAGCGC TGGTGGTGGG CGCCTTCACG ATGGGCCTGG TGATGCTCCA GCCCGACCTG
GGCACCACGA TGGTCCTCGG CGTGATCACG GCCGCCGCGC TCGTCGTCGC CGGGGTCCGC
AAACGCTGGA TCGGGGGCCT GGCCCTCCTC GTGGTCGGCG GGGCCGTGGC CGTGTGGTTC
CTCGACGTGC TGGAGCCGTA CCAGATCGCC CGGTTCACCG CCTTCCTCAA CCCCGCCAGC
GACCCGCGCG GCGTCGGCTA CAACAGCACC CAGTCGCTGA TCGCCATCGG GTCCGGGGAG
CTGTTCGGCA AGGGGTTGTT CGACGGCGGC CAGACCACCG GGCGCTTCGT GCCCGAGCAG
CACACCGACT TCATCTTCAC CGTGGCGGGG GAGGAGTTCG GCTTCCTCGG CTCGGTCACG
GTGGTGGCCC TGCTCGGCGT GATCCTGCTG CGCGGGATGC GCATCGCGCG GCAGTGCGAC
GACCGGTTCG GCACGCTGAC GGCCGGGGTG ATCGTGTGCT GGCTGGCCTT CCAGTCGTTC
GTCAACATCG GCATGACGAT CGGGATCATG CCGATCACCG GCCTTCCCCT GCCGTTCGTC
TCCTATGGCG GCACCGCGAC CTTCGCCAAT ATGATCGCCA TCGGATTGCT CCAGGCCATC
CACATACGCG AGCAGTCCTT CTAG
|
|---|
| Protein sequence | MTRATAAPRR GSFTRRAVTA SSAVRRMDGV LLVAVAALAV IGTMLVWSST RTWAPGSTGL
VKKHILNLCI GTVLTGMAAM VDHRRLRAYA PLVYGLSLLG LFLVITPLGS TVNGAHSWIM
VGGGFAFQPS EFAKLGLVLM LAMLMAQPAA GTDRPRGLDV GIALVVGAFT MGLVMLQPDL
GTTMVLGVIT AAALVVAGVR KRWIGGLALL VVGGAVAVWF LDVLEPYQIA RFTAFLNPAS
DPRGVGYNST QSLIAIGSGE LFGKGLFDGG QTTGRFVPEQ HTDFIFTVAG EEFGFLGSVT
VVALLGVILL RGMRIARQCD DRFGTLTAGV IVCWLAFQSF VNIGMTIGIM PITGLPLPFV
SYGGTATFAN MIAIGLLQAI HIREQSF
|
|---|
| |