| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7262 |
|---|
| Symbol | |
|---|
| ID | 8670576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 8010627 |
|---|
| End bp | 8011652 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Zn-dependent protease with chaperone function- like protein |
|---|
| Protein accession | YP_003342693 |
|---|
| Protein GI | 271968497 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000113025 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.243711 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGACA TGACCACCAC CCCGGATCGC AACCGCGTGC AGCTTCCCGG AATCAGCTCG
CGTGCCTACG AACATCCCGC TGACCGGTCC GCGCTGGTCG CTCTGCGCTC GCTCAGCGGG
TTCGACACGG TGCTCAAGCA GATGTCCGGA CTGGTCAGCG AGCGCCGCCT GCGCCTGATC
TACCTCGCCT CGGCCGTACG CACCAGCGAC ACCCAGTTCC GCGCGCTGCA CGACATGGGC
CGTGACGCCG CCTACACACT CGACCTTCAC CGCATCCCCG AGGTCTACGT CCAGCAGAGC
CCGCTGGTCC AGGCCAAGGC GATCGGCTTC GACGACCCGT TCATCGTCGT CAGCACCGGC
CTGCTCGACC TGATGGACGA GGAGGAGCAG CGCTTCGTCA TCGGCCACGA GACCGCGCAC
ATCCTCTCCG GCCACGCGGT CTACCGCACC ATGCTGGACA TCCTCACCCG CCTGGCCACC
CGGGTCGCCT GGATCCCGCT CGGCTACATC GGCCTGCGCG CGATCGTCGC CGGCCTGGAG
GAGTGGCACC GCAAGTCCGA GCTCTCCGCC GACCGTGGCG GCCTGCTCTG CGGCCAGGAC
ACCGACGCCG CGCTGCGCGC GTTGATGAAG CTCGCCGGCG GATCGCGCCT GCACGAGATG
AACATCGAGG CGTTCCTCGA CCAGGCACGC GAGTACGACA CGGCGGGCGA CGTCCGTGAC
GGCCTGCTCA AGGTCCTCAA CCTGCTCGGC ACCACCCACC CCTTCGCGGT CTCCCGGGTC
GCCGAGCTGG ACAAGTGGCG CCGCGGCGGC GAGTACGAAA CGATCATCGG CGGCGAATAC
CCCCGCCGGG CCGACGACTC CAACGCCAGG ATCTCCGAAG AGATCAAGGC CGCCGCCCGC
TCCTACCGCG AGTCCTGGTC GCAGTCCCAG GACCCCTTCA TCGGCGTCCT GCGTGACGTG
GCCGAGGGCG CGGTCAACGC CGGAGAGCGC ATCTTCAACC GCTTCTCCCG CCGCGACGGC
AACTAG
|
|---|
| Protein sequence | MPDMTTTPDR NRVQLPGISS RAYEHPADRS ALVALRSLSG FDTVLKQMSG LVSERRLRLI
YLASAVRTSD TQFRALHDMG RDAAYTLDLH RIPEVYVQQS PLVQAKAIGF DDPFIVVSTG
LLDLMDEEEQ RFVIGHETAH ILSGHAVYRT MLDILTRLAT RVAWIPLGYI GLRAIVAGLE
EWHRKSELSA DRGGLLCGQD TDAALRALMK LAGGSRLHEM NIEAFLDQAR EYDTAGDVRD
GLLKVLNLLG TTHPFAVSRV AELDKWRRGG EYETIIGGEY PRRADDSNAR ISEEIKAAAR
SYRESWSQSQ DPFIGVLRDV AEGAVNAGER IFNRFSRRDG N
|
|---|
| |