| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7247 |
|---|
| Symbol | |
|---|
| ID | 8670560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7997193 |
|---|
| End bp | 7998422 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | putative transmembrane major facilitator superfamily transporter |
|---|
| Protein accession | YP_003342679 |
|---|
| Protein GI | 271968483 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0299667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.140815 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC TCACCCAGGA GACCCGGGGC CGCACCGGTG GAACGACGGG ATCCCTGGCC
TGGCTGCTTG TGGCGGGAAT CGTCCTCGCC GCGCTGAACC TGCGCACCGC CGTCACGAGC
GTGGGACCGG TCCTCGACCA GATCTCATCC GGTCTGGGCA TGTCCGGAGT GGGGGTCGGG
CTCCTCACCA CACTACCCGT GCTCATCTTC GCCTCGGTCG GTGCGGTGAC GCCGGCACTG
GCCAGGAAGA TCGGTGAGCA CCGGCTGCTG CTGTTCGCCC TGATCACCCT CGGCGCCGGC
CTGCTGGTCC GCGCGATGGT GGGTTCGCCG GGGGTGTTCC TGCTCAGCAG CGCCGTGGCG
CTGTCCGGGG GCGCGGTGGG CAACGTGCTC ATCCCCACCC TGATCAAGCG CCACTTCCCG
GGCAGGGCCG GGACCATGAC CACCGTCTAC ACCACCGCCC TCGCGGTGGG CACGATGCTC
GCGGCCGCCG CTACGGTGCC GATCGAGCGG GCCGCCGACG GCAACTGGCA CGTTGCCCTC
GGGGTGTGGG CGGCGCTGGC CGCTGTCGCC GCCATTCCGT GGCTTGCGCT GTTGCGCAGT
GAGCCGGAGC GGGACACGGG CAGCAGCGAT CTCGGGCCTC GGACCCTGGT CCGGAGCAAG
CTCGCCTGGT CGGTCGCCGC GTACTTCGGC ACGCAGAGCA TGGTGGCCTA CATCATGTTC
GGCTTCCTGC CGAAGATCCT CACGGACGGC GGCTACACCA CCGGTCAGGC CGGGCTGGTG
CTGGGCGTCT TCACCGCGAT CGGCATCCCG GTCTCGATGG TCGTGCCCTG GATCGCCTCG
AAGTTCTCCG ACCAGCGGCC CGTGGTGGCG GCGTTCGTGG CCTTCTACAC GGTCGGCTTC
CTCGGCCTCT GGCTGGGCCC GGTGGGTCTG GCATGGGCGT TCGCGGTCCT GGTCGGCATC
GGGATGGGGT CCTTCCCGCT CGCGCTGACC ATGCTCGCCC TGCGTACCCG CACTCCGGAG
GCCACCGCCG CGCTGTCCGC CTTCGGGCAG AGCACCGGAT ACCTCATCGC GGGCGCCGGC
CCCCTGGTCG TCGGCGTGAT GCACGAGTCG ACCGGCGGCT GGACGCTGCC GTTCCTGCTG
CTGTTCGCGG TGGTCGGGGT CCAGCTCGTG ACCGGCTGGT ACGCCGGCCG CTCCCGCTAC
CTGGAGGACG AGCGGGCACT CGCCGGCTGA
|
|---|
| Protein sequence | MTVLTQETRG RTGGTTGSLA WLLVAGIVLA ALNLRTAVTS VGPVLDQISS GLGMSGVGVG
LLTTLPVLIF ASVGAVTPAL ARKIGEHRLL LFALITLGAG LLVRAMVGSP GVFLLSSAVA
LSGGAVGNVL IPTLIKRHFP GRAGTMTTVY TTALAVGTML AAAATVPIER AADGNWHVAL
GVWAALAAVA AIPWLALLRS EPERDTGSSD LGPRTLVRSK LAWSVAAYFG TQSMVAYIMF
GFLPKILTDG GYTTGQAGLV LGVFTAIGIP VSMVVPWIAS KFSDQRPVVA AFVAFYTVGF
LGLWLGPVGL AWAFAVLVGI GMGSFPLALT MLALRTRTPE ATAALSAFGQ STGYLIAGAG
PLVVGVMHES TGGWTLPFLL LFAVVGVQLV TGWYAGRSRY LEDERALAG
|
|---|
| |