Gene Sros_7244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7244 
Symbol 
ID8670557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7994015 
End bp7994902 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content73% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003342676 
Protein GI271968480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.782569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.220748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCG AGCGCTTCGA GGAACACCGA GACCTGCTGA CCGCGGTCGC CTACCGCGTC 
CTGGGCACCG TGACCGACGC CGAGGACGTC GTCCAGGAGG CCTGGCTGCG CTGGTCGGGG
GTGGACACGG CCGAGGTCGA GGATGACCGG GCCTACCTGA TCAGGGTGAC GACCCGGCTC
TCCATCGACC GGCTGCGGCG GGTGAAGGCG CGGCGGGAGT CCTACGTCGG GCCGTGGCTG
CCCGAGCTGG TCGGCGCCGT GCCCGACGTG GCCGAGCACG CCGAGCTGAC CGCCTCGATC
GAGCTGGCAC TGCTGGTGGT GCTGGAGACC CTGTCGCCCC TGGAGCGCGC GGTGTTCGTG
CTGCGAGAGG CGTTCGCCCT GCCGTACGCG GAGATCGGCG AGATCATCGG CCGCACCGAG
GCCACGGCCC GGCAGCTCGC CCGGCGGGCC AAGCAGCACG TGCGGGAGCG CAGGCCCCGC
TTCGAGGTGG ACCGCGCCGA GCGGCGCAGG CTGACCGAGC GGTTCGTCGG CGCGGCCTCC
GACGGTGACC TGGACGCGCT GACCGCGATG CTCGCCCACG ACGTGTCACT GGTCGGCGAC
GGCGGCGGGA AGGCCAAGGC CCCCGTCCGG GTCATCACCG GCTGCGAGAA GGTGGCGCGC
TTCCTGCTCT CCGCCGCCTC GGCCAGGGGC GTGCGCAAGT TTCTGGAGTC GCTGGGCACC
GGCCCGACCC CGGACATCGA GACGGCAGTG GCGGACGTCA ACGGCGCGCC GGCGGCCGTG
GTGACCGCCG GCGGGCGGCC GGTCTCGGTG TTCTCCCTGG TCATCCAGGA CGGCCTGATC
CAGACCGTCT TCCTGGTCGC CAACCCGGAG AAGATGTCGC GCCTGTGA
 
Protein sequence
MAIERFEEHR DLLTAVAYRV LGTVTDAEDV VQEAWLRWSG VDTAEVEDDR AYLIRVTTRL 
SIDRLRRVKA RRESYVGPWL PELVGAVPDV AEHAELTASI ELALLVVLET LSPLERAVFV
LREAFALPYA EIGEIIGRTE ATARQLARRA KQHVRERRPR FEVDRAERRR LTERFVGAAS
DGDLDALTAM LAHDVSLVGD GGGKAKAPVR VITGCEKVAR FLLSAASARG VRKFLESLGT
GPTPDIETAV ADVNGAPAAV VTAGGRPVSV FSLVIQDGLI QTVFLVANPE KMSRL