Gene Sros_7170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7170 
Symbol 
ID8670481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7917661 
End bp7919085 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content71% 
IMG OID 
ProductBeta-glucosidase 
Protein accessionYP_003342607 
Protein GI271968411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0420556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG TCGGCATTCG GGGGGCGTCC ATCACCCAGG GACGCGCGGA CTTCCCCACC 
GGGTTCGTCT GGGGCGCGGC CACCGCGTCC TACCAGATCG AGGGCGCGGT CAAGGAGGAC
GGCAGGCAGC CCTCGATCTG GGACACCTTC TCCGGCACGC CGGGCAAGGT AGCCGGGGGC
GACACCGGCG ACGTGGCCTG CGAGCACTAC TTCCACTACG CCGACGACGT CCGGCTGATG
AGCGATCTGG GCCTGCACGC CTACCGCTTC TCCGTCGCCT GGCCCCGCGT CCAGCCCGAC
GGCACCGGTC CGGTCAACCC CCGGGGCCTG GACTTCTACA GCCGCCTGGT CGACAAGCTG
CTGGAAGCCG GGATAACGCC GTACGCCACC CTCTACCACT GGGACCTGCC CCAGTCCCTG
GAGGACGCCG GCGGCTGGCC CGAGCGGGAC ACCGCCCACC GGTTCGCCGA CTACGCGCGG
GCCGTACACG AGCGGCTGGG GGACCGGGTC CGGCACTGGA CCACCCTCAA CGAGCCGTGG
GTGTCGGCCT TCCTCGGCTA CGGCAACGGG GTGCACGCGC CGGGCAGGAA GGATCCCGCC
GCTGCCCTGC GCGCGGCCCA CCATCTGCTG CTGGGACACG GGCTGGCGAC GCAGGCACTC
CGCGCCGGGG GAGCCGAGGA GATCACGCTG GTGCTCAACC TCGCACCGGT GATCACCCCG
GCGCAGGTGG GCGATCCCGC GGCCGGGCCG TCACCGGCGG ACGCCGAGGC GGTGAACCGG
ATCGACACCC TCCTCACCCG GCAGTTCCTC GACCCCGCGC TGCGCGGGCG GTATCCCGCG
GAGCTGCTGG AGATCGTCGA GCGCAACGGC GGCCTCGCCC ACATCCGCGA CGGCGACCTC
ACGACCATCA ACCAGCCGAT CGAGACGATC GGCATCAACT ACTACAACCC GTGCGTGGTC
GAGTCCGGGC CCGGCGAGGC CGCCGACGCG GCGTGGCCGG GCAGCGAGGA CGTCCGCTTC
TGCGCGGTCG ACGCGCCGGT CACCGCGATG GGCTGGCCGA TCGTGCCCAA CGGGCTGTCC
CGCCTGCTGG TACGGCTGGC CGACGACTAT CCCGAGGTCG GCCTGATCGT CACCGAGAAC
GGCGCCGCCT TCGACGACGT CGTGGAGGAC GGCCGGGTCC ACGACACCGG CAGGACCGGC
TATCTGGACG GCCATCTGCG CGCCGTGCAC GCCGCGATCG CCGCGGGCGC GGACGTGCGG
GGCTATCTGG TCTGGTCGCT GCTGGATAAT TTCGAATGGG CCGAGGGATA CCGGCGTAGG
TTCGGCATCG TGCACGTCGA CTTCGCCACC CAGCGGCGCC TGCTCAAGGA CAGCGCGCTG
TGGTATCGCG AGGTCATCAA GCGGAACGGA CTGCGGGGGA ACTAG
 
Protein sequence
MTIVGIRGAS ITQGRADFPT GFVWGAATAS YQIEGAVKED GRQPSIWDTF SGTPGKVAGG 
DTGDVACEHY FHYADDVRLM SDLGLHAYRF SVAWPRVQPD GTGPVNPRGL DFYSRLVDKL
LEAGITPYAT LYHWDLPQSL EDAGGWPERD TAHRFADYAR AVHERLGDRV RHWTTLNEPW
VSAFLGYGNG VHAPGRKDPA AALRAAHHLL LGHGLATQAL RAGGAEEITL VLNLAPVITP
AQVGDPAAGP SPADAEAVNR IDTLLTRQFL DPALRGRYPA ELLEIVERNG GLAHIRDGDL
TTINQPIETI GINYYNPCVV ESGPGEAADA AWPGSEDVRF CAVDAPVTAM GWPIVPNGLS
RLLVRLADDY PEVGLIVTEN GAAFDDVVED GRVHDTGRTG YLDGHLRAVH AAIAAGADVR
GYLVWSLLDN FEWAEGYRRR FGIVHVDFAT QRRLLKDSAL WYREVIKRNG LRGN