| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7152 |
|---|
| Symbol | |
|---|
| ID | 8670463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7899394 |
|---|
| End bp | 7900374 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | D-3-phosphoglycerate dehydrogenase |
|---|
| Protein accession | YP_003342590 |
|---|
| Protein GI | 271968394 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.484236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0114413 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCATGGA GGGTGCTGGC GCTGCCGCCG CTTCCCGAGG AGGCGCTGCG CAACCTGCTC
GGCCCGCTGG GAGAGCGGGT CGAGGTGTCC GTCCCGGCCC GCCGCGACCG GGATGCCCTG
CTCTCCGCCC TGCCGGAGGC CGAGATCGTG GTCGGCGACT GGAGCGGCGG GCTCGCGCTG
GACGCCGAGG CCGTCCTTGC CGCCCCGCGC CTGGCGTTCG TGCAGCAGCC CTCGGTGGGC
GTGGACGGCC ACGATCTCGG CGCGCTGGCC GCCGCCGGAG TGCCGCTGGC CAACGCCGCG
GGAGTGAGCG CGATCGCGGT GGCCGAGTGG TGCTTCGCCG CCGCGCTCGC GCTGTCCAGG
CGGCTGCTCG ACGCCGACGC CGCGGTCCGC GCGGGCGGCT GGCCCCAGCT CGACCTCGGC
CCCAGAGAGC TGTACGGCTC GCGCGTGGGC ATCGTCGGCT TCGGCCCGAT CGGCGAGGCG
TGCGCCCGGA TGTTCGCCGG CCACGGCTGC GAGGTGTCCT ACTGGACGCG GCGCCCCCGC
GAGGTGCCCT ACGCCTACCG GGAGCTGGAG GCGCTGGTCG CCGGCTCCGA CGTGCTCGTG
ACGGTGATCG CGCTGTCGGA GGAGACCCGG GGCCTGATCG ACCCGTCCCG GATGCCCGCG
GGATCGCTGC TGGTCAACGC CGCCCGCGGG GGAGTGGTGG ACCAGGCGGC GCTGCTGTCC
GCCCTGGAGT CCGGGCACCT GGGCGGTGCC GCGCTGGACG TGTTCGAGAC CGAGCCGCCG
CCGCCCGGAG ACCCGCTGCG CGACAGCGCC CGGGTGCTGC TGTCGCCGCA CGTGGCCGGG
GTGACCCCGC AGTCCACCGG CCGCCTGGTC CGGTGCGTGC TGGACAACCT GCGGGCCGCG
GTGGAGGGAC GTCCTGTGGC CAACGTGCTC AACGGGGTGG AGCCGGTGGT CCGGCGCCGT
CCCGGGGGCG GACGTACATA G
|
|---|
| Protein sequence | MAWRVLALPP LPEEALRNLL GPLGERVEVS VPARRDRDAL LSALPEAEIV VGDWSGGLAL
DAEAVLAAPR LAFVQQPSVG VDGHDLGALA AAGVPLANAA GVSAIAVAEW CFAAALALSR
RLLDADAAVR AGGWPQLDLG PRELYGSRVG IVGFGPIGEA CARMFAGHGC EVSYWTRRPR
EVPYAYRELE ALVAGSDVLV TVIALSEETR GLIDPSRMPA GSLLVNAARG GVVDQAALLS
ALESGHLGGA ALDVFETEPP PPGDPLRDSA RVLLSPHVAG VTPQSTGRLV RCVLDNLRAA
VEGRPVANVL NGVEPVVRRR PGGGRT
|
|---|
| |