Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_7137 |
Symbol | |
ID | 8670448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 7873533 |
End bp | 7875506 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | small GTP-binding protein |
Protein accession | YP_003342575 |
Protein GI | 271968379 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.43752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACACCC TCAACATCGG CATCCTCGCC CATGTCGACG CGGGCAAGAC CAGTCTCACT GAGCGACTGC TGTTCGACAC CGGCGCCATC GACCGGCTCG GCAGCGTCGA CGCCGGCAGC ACCCAGACCG ACACGGGCGA CATCGAACGG CGGCGCGGCA TCACGATCCG CTCCGCGGTC GCCTCCTTCA CCGTCGGCAC CTCACAGGTC AACCTGATCG ACACCCCCGG CCACTCCGAC TTCATCTCCG AGGTCGAACG GGCACTCGGC GTGCTCGACG GCGCCGTCCT GGTCCTGTCG GCCGTGGAAG GCGTCCAGGC GCAGACCCGC GTCCTGATGA AGACCCTGCG GAAGATGCGC CTGCCGACCC TGGTCTTCGT CAACAAGATC GACCGTGCCG GAGCCCGGCA CGAGGAGATG CTGGCCGACA TCCGGCGGAA GCTGTCACCG CAGGTCGTCC CCATGAACGC GGTCCGGCAG GCCGGTTCCC CGGCCGCGCG CACCGTCCCG ATCTCCCTGG ACGGACCGGA CTCCCGCTCC CGGGTGGCGG AGATCCTCGC AGAGAGCGAC GATACGCTGC TCGCCGACCT CGTCGCCGGC TCGATCCCCA CCGCCGGCCG CGTCCTGGCG GAGGTACGCG CCCAGACCGC CGCAGGCCTG CTCCACCCGG TGTTCTTCGG CTCGGCCCTG ACCGGCCAGG GGATCGAGGC GCTCATCGAC GGGATCTCAC GGCTGCTCCC GCCGGCGCGC GGCACCGGAG ACGGCGATCC CCGGGCCACC GTCTTCGCCG TCGAACGCGG CGGTGCCGGC GAGAAGGTCG CCTACCTGCG GATGCACTCC GGTGAGCTGC GCGCGCGGCA GCGGATCACC TCCTACCGGC TGGAGGCGGA CGGTGACGTC AGCGAGAACA GCGAGCAGAT CACCGCACTC CACGTCATCG GGCCGGTACG GCGGGAGGCC CACCAGGCGG CGGCGGGCGA CATTGCGAAG GTGTGGGGTC TGTCCCGCAT CCGGGTCGGC GACCAGGTCG GCTCGGCGCG CGGGCTCGCC GGCCAGTCGC ACTTCGCGCC GCCCACCCTG GAGGCCCTCG CCCGGCCGAA GCAGGCTGAG CAGGCCGCGC GGCTGCACGC CGCGCTCGTG AGCCTCGCCG ACCAGGACCC ACTGATCCAC ACGCGTGCCG TCCCCGGTGA GGGGACCTCG GTCCTGCTCT ACGGCGAGGT GCAGAAGGAC GTCATCGCGG AGACCCTCCT CCACGAGTTC GGCGTCGAGG CCGTGTTCGA GCAGAGCCGT ACGGTCCACC TGGAACGGCC GGTGGGGGTG GGGGAGGCCT GCGAGGAGAT CGGCGAGCAC GGGCCCGGCG GCTTCTTCGC GACCGTCGGG CTGCGGGTCG AACCCGCGAC CGGGCCGGGG ATCACTTTCA GGCGGGAGGT CGAGCTCGGT TCACTGCCGC GCCCCTTCCA CCGGGCGATC GAGGACACCG TGCGCCGCAC CCTGGAGCAG GGGCTGCACG GCTGGGCGGT GACCGGCTGC CTCGTCACCC TGACCCGGAC GGGCTACGCG GCCCCGGTCA GCACGGCCGG TGACTTCCGC GGCCTCACGC CCCTGGTCCT GATGCGCGCC CTGGACATCG CCGGAACCCG GGTCTACGAG CCCTGCCACG CCTTCGAGCT GGAGGTCCCC CCTGACGGGC TCAGCGCCGT CACCGCCCAG CTCGCCGCGC TCGGAGCCGA CATCATGGAG TCCTCCGGAG GCACGGAGAC ATGGTCGGTC AAGGGGGACA TCCCCGCGCG TCGGGTGCGC GAGTTCGAGC GGCAACTGCC CGGTCTGTCC CACGGAGAAG GGGTCTGGTG GTCGCGACCG TCGGGGGATC GGCCGGTCCT CGGGCCGGTC CCGGTGCGCG CGCGGTCGGA CGGCAACCCG CTCAACCGGA GCGAATACCT GCGGCACCTC GCACAGCGGG GCACGGCGAG GTGA
|
Protein sequence | MHTLNIGILA HVDAGKTSLT ERLLFDTGAI DRLGSVDAGS TQTDTGDIER RRGITIRSAV ASFTVGTSQV NLIDTPGHSD FISEVERALG VLDGAVLVLS AVEGVQAQTR VLMKTLRKMR LPTLVFVNKI DRAGARHEEM LADIRRKLSP QVVPMNAVRQ AGSPAARTVP ISLDGPDSRS RVAEILAESD DTLLADLVAG SIPTAGRVLA EVRAQTAAGL LHPVFFGSAL TGQGIEALID GISRLLPPAR GTGDGDPRAT VFAVERGGAG EKVAYLRMHS GELRARQRIT SYRLEADGDV SENSEQITAL HVIGPVRREA HQAAAGDIAK VWGLSRIRVG DQVGSARGLA GQSHFAPPTL EALARPKQAE QAARLHAALV SLADQDPLIH TRAVPGEGTS VLLYGEVQKD VIAETLLHEF GVEAVFEQSR TVHLERPVGV GEACEEIGEH GPGGFFATVG LRVEPATGPG ITFRREVELG SLPRPFHRAI EDTVRRTLEQ GLHGWAVTGC LVTLTRTGYA APVSTAGDFR GLTPLVLMRA LDIAGTRVYE PCHAFELEVP PDGLSAVTAQ LAALGADIME SSGGTETWSV KGDIPARRVR EFERQLPGLS HGEGVWWSRP SGDRPVLGPV PVRARSDGNP LNRSEYLRHL AQRGTAR
|
| |