| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7096 |
|---|
| Symbol | |
|---|
| ID | 8670407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7824871 |
|---|
| End bp | 7826607 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | ABC-type dipeptide transport system periplasmic component-like protein |
|---|
| Protein accession | YP_003342536 |
|---|
| Protein GI | 271968340 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATATCAA TCCGGCGCGT GGGCGCGTTC GCCGCCGCCC TGAGCGTGGC CGGCTCGTTG
GCGCTGGCCG GCTGCGGCAG CCAGGGCGGG AGCGGCGGAG GCAGCCGGAG CGGCACGGGA
GGGGAGCCGT CAGCCGGTTC CGCCTCGGCG GTCAAGGCCT ACGACATCAA CCCGGTCCCC
CGGGACAGGG TCCGCGAGGG AGGCCAGCTC CGCTGGGGGC TCAACGAGTA TCCGACCAAC
TGGAACCTCA ACCACGTCGA CGGCAACCTG GCGATGGTCA AGAAGGTCAT CGACGCGCTC
ATGCCCTCCG CCTTCCGCTC CGACGAGAAG GGGGAGATCT CGGCGAACAC CGACTACCTG
TCGGAAGGGG TGATCACGGC CCGCAAGCCC AAGCAGGTCG TCAGGCTGAC CCTCAACCGG
AGTGCCCGGT GGTCCGACGG AAAGCCGATC ACCTGGGAGG ACTACAGGGC CCAGTGGCAG
GCGATGAGCG GTAAGAACGG CGACTACCGC GTCGCGGGCA CCACCGGCTA CCAGGACATC
GAGAGCGTGG CGAAGGGCAA GGACGACCAC GAGGTCGTCG TCACCTTCGC CAAGCCCTTC
GGCGACTGGC AGTCGCTGTT CGGGCCGCTC TATCCCAAGG CGACCAACGC CACCCCCGAC
GGGTTCAACA ACGGATGGCT GAACAAGATC CCGGTGACCG CGGGCCCGTT CAAGTTCGTC
TCGTTCGACC AGACGGCCAA GACCGTCACC ATCGTCAGGG ACGACGCCTG GTGGGGGGAC
AGGGCCAAGC TGGACCAGAT CATCTACCGG GCGCTGGAGA GCGACGCGCT GGTCGGCGCC
TTCAGCAACG GTGAGCTCGA CACCTTCGAC GTCGGCCCGT CCGCGCCCGA CTACGCGCGG
GCCAAGAGCA CCCAGGGCGC CATCGTGCGG CAGGCGGCCG GCCCCGACTT CCGGCACATC
ACGATGAACG GCGAGAGCGC CGTGCTCTCC GACGTCAACG TCCGCCGGGC CGTCGCGATG
GCCATCAACC GCCAGGCCAT CGCCCAGTCC GACCTGCAGG GCCTGGACTG GCCGATCGTC
CTGCTGAACA ACCACTTCTT CATGAACACC CAGGAGGGCT ACCAGGACAA CGCGGGCGAG
GTCGGCGTCC ACAACGTCGA ACGGGCCGCG CAGCTGCTGG ACGCCGCCGG GTGGCGGCTG
GAGGGGCAGA CCCGCAAGAA GGACGGCAGG GAGCTGGCCC TGCGGTTCGT GATGCCGTCC
GGCCTGCAGC TCACCAAGTC CGAGGCGGAG ATCACCCAGA GCATGCTGGC CCAGGTCGGC
GTCAAGGTCA CCCTCCACGC GGTGCCCAGT GACGACTACT TCACCAGATA CATCATCCCC
GGCAACTACG ACATCACCGC CTTCGCCTAC GTGGGCACGC CCTTCCCCGT CTCCAGCGGC
TACGGCCAGT ACGCCGACGC CACCAAGGAT TCCAAGGGCC GGCTGCAGTG GAACGCCAAC
CTCGGCCGCA TCGGCTCCCC GCAGATCGAC GCCGCCATGA ACAAGGCGAC CGCCGACCTC
GACGGAGCCC AGGCCATCGC CGACACCAAC GCCGCGGACA AGCTGATCTG GGAGGCGGTC
AACGTGGTGA CCCTCTACCA GCGCCCGCAG AACGTCGCGG TCAAGAACAC CCTCGCCAAC
TACGGCGCCC GCGGCTTCTA CGACCTGAGA TACCAGGACA TCGGCTTCAC GGGCTGA
|
|---|
| Protein sequence | MISIRRVGAF AAALSVAGSL ALAGCGSQGG SGGGSRSGTG GEPSAGSASA VKAYDINPVP
RDRVREGGQL RWGLNEYPTN WNLNHVDGNL AMVKKVIDAL MPSAFRSDEK GEISANTDYL
SEGVITARKP KQVVRLTLNR SARWSDGKPI TWEDYRAQWQ AMSGKNGDYR VAGTTGYQDI
ESVAKGKDDH EVVVTFAKPF GDWQSLFGPL YPKATNATPD GFNNGWLNKI PVTAGPFKFV
SFDQTAKTVT IVRDDAWWGD RAKLDQIIYR ALESDALVGA FSNGELDTFD VGPSAPDYAR
AKSTQGAIVR QAAGPDFRHI TMNGESAVLS DVNVRRAVAM AINRQAIAQS DLQGLDWPIV
LLNNHFFMNT QEGYQDNAGE VGVHNVERAA QLLDAAGWRL EGQTRKKDGR ELALRFVMPS
GLQLTKSEAE ITQSMLAQVG VKVTLHAVPS DDYFTRYIIP GNYDITAFAY VGTPFPVSSG
YGQYADATKD SKGRLQWNAN LGRIGSPQID AAMNKATADL DGAQAIADTN AADKLIWEAV
NVVTLYQRPQ NVAVKNTLAN YGARGFYDLR YQDIGFTG
|
|---|
| |