Gene Sros_7089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7089 
Symbol 
ID8670400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7816534 
End bp7818627 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content72% 
IMG OID 
ProductSerine phosphatase RsbU regulator of sigma subunit-like protein 
Protein accessionYP_003342529 
Protein GI271968333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0288523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG AAACCTCCGT GCCCCGTCCC CGGGAGTCGG GTGTGGACAT CTCAGACCCC 
GGCCTGCTGC AGGGCCTGTT GTCGCAGTCG CCGTTCGCCT TCGCGTTCTT CGACCCCGAC
GGCCGCTTCC AGCGGGTCGA CGAGGTCTTC GCCGACGTGG TCGGTCTCCC GGTCGAGCGC
CTGGTCGGCC GGGCCCCGGG CGAGTTGCTC TCCGCCGACC TCACCGCGCT GGTGGAGGGG
TCGGTCCGCG GCGTCGTCGA AGGGACCGGG GTCGAGGCGG ACCAGCGGAT CCGGGTGCGC
ACCGCCGACG GGCAGACCCG TCACTGGTCG CTGACGTTCT CCCCGATCCA CGACGACAAG
AGCGAGCTCC GCGCGGTCTG CCTGGTCGGC GTGGACATCA CCGAGAGCAG GCAGGTCGAG
GAGGACCTGC GGCGCAGCGA GGAGCGCTAC CGCTCGCTGG TCGAGGCGCA GTCCCAGCTC
GTGTGGATCA CCGCCCCGAC CGGGGCCGTG GTGGAGGACG CGCCGCAGTG GCGCGCCATC
ACCGGCCAGG GCCTGGAGGA ATACCTCGCC CACGGCTGGC TGGAGGCCGT CCATCCCGAC
GACCGGCCGC ACGCGGAGGA GGCCTGGCGC GAGGCGCTGC GCGGCCGGAT CATGTTCGAG
TGGAACTACC GGGTCCGCAC CCGGGCCAGC GGTTACCGCC ACTTCGAGGT GCGCGCGGTC
CCGATCATCC GCCACGGCCG GGTGGTCGAG TGGGTGGGCG CCAACACCGA CGTCACCCCC
CAGCGCGAGG CCGAGGAGAT GCGCGGCCGG CTCACCGACC AGCTCGGCGC GGCCGCCCTG
CGTACGGCAC GGCTGCAGGG CGCCACGGCG CAGCTCGCCG AGGCGCTCAC CGTCGAGCAG
GTCGTCCAGG TCATCATCGA CGTCGGCCGT ACGGCACTGG CGGCCGACCG CTCGGCGGTG
GCCCTGCTCG ACGTCGAGCG GGCCGCGCTG AAGCTGGTCA ACAGCGGTGG CATCCCCGAT
GTTCCCGGTG CGCCCGGCGA GGAGATCCCG CTGTCGCACT CCAGCGTGAT GACCATGGCG
GTCAACAGCC GCCGTCCGGT CTTCGCCGAA TCGCCCGACA GCCTGCGCTC CCAGCTCGTG
GACGCCGGGG GCGACGACGA GGCCGTCACC GGCTTCATCG ACCACAGCGA CGAGCGGGCC
TGGGTGGGCC TGCCGCTGCT GGCCGCGGGA CGCGCGCTCG GCGCGCTGAG GTTCTCCTTC
ACCCGTCCGC AGAAGATCTC CCAGGAAGAC GGCGTGTTCC TGGAGGCGCT CGCCGGGCAG
TGCGCCCTGG CCGTGGAGCG GGCCACCCTG TTCGAGCGTG AGCACCGCAC CGCCGAGACG
CTCCAGCGCA GCCTCCTGCC CGATCGCCTG CCGGTGGTGC GCGGCCTGGT GCTGGCCCAG
CGCTTCCGCT CGGGCAGCCG TCACGTGCAG GTCGGCGGAG ACTGGTACGA CGCGTTCGTC
CTGCAGGACG GCCGGGTCGC CGCGGTGGTC GGCGACGTCA TGGGCAAGGG CGTCAAGGCC
GCGGCCGGCA TGGGCCGCAT CCGCAACGCG ATGCGGGCCC TGGCGCTGAC CAATCCGCCG
CCCGCGGCGG TCCTCACCGG CCTGGACCGG GTCTTCGAGG CCACAGAGGA GGAAGAGCAG
GTCACCACCC TCGCCTACAT GGTCGTCGAA CCCGGCACGG GAGAGGGCAC GCTGGCGCTG
GCCGGCCACC CGCCGCCCCT GCTGGTCTCA CCGCAGGGCA TGCCGCTGCT GTGCGACGGC
GAGCCGGGCA CCCCGCTCGG CTGGCCGACG AGCCGCAGGC AGTTCCGGTT CTGTGTCCCG
CCGGGGCACA CCGCTGTCCT TTATTCGGAT GGTCTGGTGG AGAACCGGAA GCGTGGGCTG
GATGCCGGAC TCGCTGAACT TTGCTCTGTT GTGACCGAAG CGCCGCCCGA AGTCGTCGGA
AGTCCGCATA TGTTGCTGGA TTTCCTTGTG GATCGGATGC TGTCGGGGTA TGAGCAGGAT
GATGACGTTA CGGTGCTGGC GATTCACGTC CCTCCGGCCA CGAAGAGTGA CTGA
 
Protein sequence
MSAETSVPRP RESGVDISDP GLLQGLLSQS PFAFAFFDPD GRFQRVDEVF ADVVGLPVER 
LVGRAPGELL SADLTALVEG SVRGVVEGTG VEADQRIRVR TADGQTRHWS LTFSPIHDDK
SELRAVCLVG VDITESRQVE EDLRRSEERY RSLVEAQSQL VWITAPTGAV VEDAPQWRAI
TGQGLEEYLA HGWLEAVHPD DRPHAEEAWR EALRGRIMFE WNYRVRTRAS GYRHFEVRAV
PIIRHGRVVE WVGANTDVTP QREAEEMRGR LTDQLGAAAL RTARLQGATA QLAEALTVEQ
VVQVIIDVGR TALAADRSAV ALLDVERAAL KLVNSGGIPD VPGAPGEEIP LSHSSVMTMA
VNSRRPVFAE SPDSLRSQLV DAGGDDEAVT GFIDHSDERA WVGLPLLAAG RALGALRFSF
TRPQKISQED GVFLEALAGQ CALAVERATL FEREHRTAET LQRSLLPDRL PVVRGLVLAQ
RFRSGSRHVQ VGGDWYDAFV LQDGRVAAVV GDVMGKGVKA AAGMGRIRNA MRALALTNPP
PAAVLTGLDR VFEATEEEEQ VTTLAYMVVE PGTGEGTLAL AGHPPPLLVS PQGMPLLCDG
EPGTPLGWPT SRRQFRFCVP PGHTAVLYSD GLVENRKRGL DAGLAELCSV VTEAPPEVVG
SPHMLLDFLV DRMLSGYEQD DDVTVLAIHV PPATKSD