Gene Sros_7080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7080 
Symbol 
ID8670391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7805742 
End bp7808237 
Gene Length2496 bp 
Protein Length831 aa 
Translation table11 
GC content70% 
IMG OID 
ProductDNA topoisomerase (ATP-hydrolyzing) 
Protein accessionYP_003342520 
Protein GI271968324 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGAC GGACGACCAC ACCCCCGACT GACGAGGATT TCGAGGAGCG GATCGTCGAC 
ATCGACGTCT CCGCCGAGAT GCGCACCAGC TTCCTCGAAT ACGCATACTC GGTCATCTAC
CAGCGTGCGC TGCCCGACGC CAGGGACGGC CTCAAGCCGG TCCAGCGCCG CATCCTCTAT
TCCATGAGCG AGATGGGCCT GCGGCCCGAC CGGGGACACG TCAAGTCGTC ACGGGTCGTC
GGCGACGTGA TGGGCAAGCT GCATCCGCAC GGCGACACCG CCATCTACGA CGCGCTGGTC
CGCATGGCCC AGCCGTTCTC GATGCGGCTG CCGCTGATCG ACGGGCACGG CAACTTCGGC
TCCCCCGACG ACCTGCCCGC CGCGATGCGT TACACCGAGG CCCGGCTGGC CGCGGCGGCC
ATGGCCATGG TGCAGTCGAT CGACGAGGAC ACCGTCGATT TCAAGCCCAA CTACGACGGC
CAGGAGACCG AGCCCACGGT CATGCCGTCG GCGTTCCCGA ACCTGCTGGT CAACGGGGCC
ACCGGCATCG CGGTCGGCAT GGCGACCAAC ATGGCGCCGC ACAACCTCGT CGAGGTCGTC
GCGGCGGCCC GCCATCTGAT CAAGAAGCCC GACGCCACAC TCGACGACCT GATGCGGTTC
GTCCCGGGGC CCGACCTGCC CACCGGCGGC ACCATCATCG GCCTGGACGG CATCCGCGAC
GCCTACGCCA AGGGCCGGGG GACCTTCCGG ATGCGCGCCA AGTGCTCCGT GGAGCAGGTC
AGCCCCCGGC GCAAGGGCAT CATCGTCACC GAGCTGCCGT TCAACGTGGG CCCCGAGCGG
GTGGTCACCA AGATCAGAGA GCTGGTCACC GCAAAGAAAC TCCAGGGCAT CTCCGACCTG
AAGGACCTCA GCGACCGGCA CAAGGGCCTG AACCTGGTCA TCGAGATCAA GAACGGCTTC
ATCCCCGAGG CCGTGCTGGA GGAGCTCTAC CGGCTGACGC CGATGGAGGA GACCTTCGGC
ATCAACAACG TCGCCCTGGT GGAGGGCCAG CCGCGCACGC TGGGGCTGCG CGAGCTGCTC
CAGGTCTACG TGGACCACCG CCTCGACGTG GTCCGCCGCC GTTCGGCCTA CCGCCGCCGC
AAGCGCGAGG ACCGTCTCCA TCTCGTCGAG GGCCTCATCA TCGCCCTGCT CAACATCGAC
GAGGTCATCC AGGTCATCCG CTCCTCGGAC GACTCGGCCC AGGCCCGCGA GCGGCTGATG
GAGGTCTTCG AGCTGTCGGA GATCCAGGCC GCCTACATCC TGGACACCCC GCTGCGCCGC
CTGACCCGCT TCGACAAGCT GGAGCTCGAC GGGGAGAAGG AGACCCTGGA GAGCGAGATC
GCCGAGCTGA CCGCGATCCT GTCGTCCGAG GACAAGCTCC GCAAGGTCGT CTCCGACGAG
CTCGCCCAGG TCTCCAAGAC CTTCGGCACG CCCCGCCGTA CGGTGCTGCT GGAGTCCTCC
GGCGTCACCA GGAACGCCTC GGTGCCGCTG GAGGTGGCCG ACGACCCGTG CCTGGTGCTG
TTCTCCTCGA CCGGCCTGCT GGCCCGGACG ACCGACGCCT CCCCGCTGGC CGGCGAGGGT
GACCGCTCGG CCCACGACGT GCTGGTCTCC GTGGTGAACA GCACGGTCAG GGGCGAGGTG
GGCGTGGTCA CCAACCAGGG CCGGATGATC CGCGTCCAGG TGGTCGACCT GCCGACGCTG
CCTCCCTCGG CCAACCCGCC GTCGCTCTCC GGCGGACACC CCGTGTCCGA ATACGTCACG
CTGAGCCCGG GTGAGACGGT CGTCGGCATC GGCTCGCTCG ATCCCGACGG CCCCGGCCTG
GCGCTGGGGA CCGCGCAGGG CGTGGTCAAG CGGGTCGTCC CCGACTACCC GGCCAACCGC
GACGACTTCG AGGTCATCGG GCTCAAGGAC GGCGACACCG TGGTCGGGGC GGTGGAGCTG
ACCTCCGAGG ACCACGACCT GGTCTTCATC ACCTCCGAGG CCCAGCTGCT GCGCTACCCC
GCCGTCAACG TCCGGCCGCA GGGCCGCCCG GCGGGCGGCA TGGCGGGCGT CCGCCTGGAC
GGCGGTGCCA CCGTGATCTG GTTCGGTGTG GTCGATCCGG CGCGCGAGTC CCGGGTCGTG
ACGATCGCGG GATCCTCCAC CGCACTGCCC GGCACCCAGA TCGGCGGCGC GAAGATCTCC
GACTACGCCG AGTATCCGGC CAAGGGGCGC GCCACCGGCG GCGTCCGGGT CCAGCGTTTC
CTCAAGGGCG AAGACGTGCT GCTCCTCGCC TGGGCGGGCC CCGCACCGGC CCGCGCGGTC
TCCACCGTCG GCAAGCCGGT CCCGCTGCCG GAGGAGCTGG GCCGCCGCGA CGGTTCCGGT
GTCCGGCTCA CCCACACGGT GGCGGCCGTG GGCGGCGCCC TCGGCGCGTC CGGCGGGGAG
CCCGCCGCCG AGAAACCGGC CCCCTCGGAG CAGTGA
 
Protein sequence
MARRTTTPPT DEDFEERIVD IDVSAEMRTS FLEYAYSVIY QRALPDARDG LKPVQRRILY 
SMSEMGLRPD RGHVKSSRVV GDVMGKLHPH GDTAIYDALV RMAQPFSMRL PLIDGHGNFG
SPDDLPAAMR YTEARLAAAA MAMVQSIDED TVDFKPNYDG QETEPTVMPS AFPNLLVNGA
TGIAVGMATN MAPHNLVEVV AAARHLIKKP DATLDDLMRF VPGPDLPTGG TIIGLDGIRD
AYAKGRGTFR MRAKCSVEQV SPRRKGIIVT ELPFNVGPER VVTKIRELVT AKKLQGISDL
KDLSDRHKGL NLVIEIKNGF IPEAVLEELY RLTPMEETFG INNVALVEGQ PRTLGLRELL
QVYVDHRLDV VRRRSAYRRR KREDRLHLVE GLIIALLNID EVIQVIRSSD DSAQARERLM
EVFELSEIQA AYILDTPLRR LTRFDKLELD GEKETLESEI AELTAILSSE DKLRKVVSDE
LAQVSKTFGT PRRTVLLESS GVTRNASVPL EVADDPCLVL FSSTGLLART TDASPLAGEG
DRSAHDVLVS VVNSTVRGEV GVVTNQGRMI RVQVVDLPTL PPSANPPSLS GGHPVSEYVT
LSPGETVVGI GSLDPDGPGL ALGTAQGVVK RVVPDYPANR DDFEVIGLKD GDTVVGAVEL
TSEDHDLVFI TSEAQLLRYP AVNVRPQGRP AGGMAGVRLD GGATVIWFGV VDPARESRVV
TIAGSSTALP GTQIGGAKIS DYAEYPAKGR ATGGVRVQRF LKGEDVLLLA WAGPAPARAV
STVGKPVPLP EELGRRDGSG VRLTHTVAAV GGALGASGGE PAAEKPAPSE Q