Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_7011 |
Symbol | |
ID | 8670321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 7733414 |
End bp | 7735075 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003342454 |
Protein GI | 271968258 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.140564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00365141 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGCGCG ACCCCCTCGC ATCCGTATCG ACGATCGCGA CCCCGCAGAC CCGGCGTATC CCCGGCCGCA CCGACCAGGT CAGGAACGCC GCCGGCGGCT ACGTCTTCGC CAAGGACACC TGGACGCGTC TGGAGGACTT CCTCGTCCTC GGCACGAACG GCGGCACCTA CTACGTGGGC GAGGACAGGC TGACCGCGGA GAACGCCGAG GTGCTGTTCC GGGCGATCGC CGAGGACGGG CCTCGCGTCG TCGCCCTGCT CACGGATGTC TCCACCGCCC GCCCGTCGCG GGCGCCGAAG AACCGGCCCG CCCTGTTCGC CCTGGCCGCC GCGTACGCCA AGGGCGACGC CGACACCCGC CAGGCCGCCA AGCTCGCCCT GTCGAAGGTG GCCCGTACGA CCGATCACCT GGCGACGTTC TTCGGCTACT ACAAGAACCT CGGCGGCAAG GCGACTGGCC GCGGCACCGC CCCGGTGGCC GGTCGCAGCC TGCGCTCGGC ACTCGGCTCG TGGTTCCTCA CCGGCTCACC GGACGACGTC GCGTTCAAGG CGTGCAAGGC CGCCCAGCGC AAGACCCCGT CCGGCGAGGC GTTCTCGCTG CGAGACGTGC TGCGCATCGC CCACCCGGCC GCTGACGGCG ACCAGCGCAG GACCTTGTTC GGGTGGATCG CGGGAAACGT CACCGACGGG CAGGCTCGCG AGGTGCTGCC TGCGGTGGAC CGGTTCCTGA CCGCCAAGAC CGTCACCTCC GCCGCGGAGG CGGTCGGTGT GGTCACCGAG CGGCGGGTGC CGTGGGAGTT CCTTCCCGAC GCGATGCTCA CCGAGCCGTC GGTGTGGGAC GCGCTGGTCG ACACGGTCGG CATGACCGCG CTCCTGCGGA ACCTGGCCCG CATGACGCGC ATCGGCACGC TCGGCCCGAT GAGCGACGCC ACCCGCCGTG CCGTCGCCCG GCTGACCGAC GCCGACGCGC TGGCGAAGGC GCGCGTCCAC CCGATGGACG TGTTCCTCGC CCTGCGCGTC TACGGCTCCG GCCGCGCCCA GCCCAACCCG CGCGCCGCCG CGCACACCTG GCAGCCCGTC CCGGCCATCC GTGACGCGCT GGAGGAGGCA TACGAGGCCT CGTTCGGCCA CATCGAGCCG ACCGGCAAGC GGCTGCTCGT CGCCGTCGAC TCGTCGGGGT CGATGAGCTA CGCCGGCGTC ACCGCGGGCG GGTCCCGGCT CGGCACCGTG TACGAGGTGG CGTGCGCCAT GGCCGTCATG CTCGCCCGCA TCGAGAGGGA CAACCTGCAC GTCATCGACG TCGACACGGC CGTCCACGCC TCCAAGGTGA CCCCGCGTAC GAACTTGAGG GAGATCGCCT CGTGGCGGCC CTCGGGCGGC GGCACCGACC TGTCGCTGCC GTTCACCTGG GCGAAGCAGC GGAGACTGGA GGTGGACGGG GTGGTCGTGT TCACCGACAA CGAGACGTGG TCAGGCCGCT CCCACCCGGT CCAGGCACTC GCCGGCTACC GCAAGTCGGT GAACCCGAAC ACGCGGGTCG TCGTGGCTGC GATGACCGCC GGCGGATACT CGGTCGGCGC CCCGGAGGAC GAGGACGTGC TCAACGTCGT CGGGCTGGAC GCGTCCCTCC CGATGATCGT CAACGGGTTC ATCCGGGCCT GA
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Protein sequence | MARDPLASVS TIATPQTRRI PGRTDQVRNA AGGYVFAKDT WTRLEDFLVL GTNGGTYYVG EDRLTAENAE VLFRAIAEDG PRVVALLTDV STARPSRAPK NRPALFALAA AYAKGDADTR QAAKLALSKV ARTTDHLATF FGYYKNLGGK ATGRGTAPVA GRSLRSALGS WFLTGSPDDV AFKACKAAQR KTPSGEAFSL RDVLRIAHPA ADGDQRRTLF GWIAGNVTDG QAREVLPAVD RFLTAKTVTS AAEAVGVVTE RRVPWEFLPD AMLTEPSVWD ALVDTVGMTA LLRNLARMTR IGTLGPMSDA TRRAVARLTD ADALAKARVH PMDVFLALRV YGSGRAQPNP RAAAHTWQPV PAIRDALEEA YEASFGHIEP TGKRLLVAVD SSGSMSYAGV TAGGSRLGTV YEVACAMAVM LARIERDNLH VIDVDTAVHA SKVTPRTNLR EIASWRPSGG GTDLSLPFTW AKQRRLEVDG VVVFTDNETW SGRSHPVQAL AGYRKSVNPN TRVVVAAMTA GGYSVGAPED EDVLNVVGLD ASLPMIVNGF IRA
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