Gene Sros_6994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6994 
Symbol 
ID8670304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7711850 
End bp7712344 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003342437 
Protein GI271968241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00939559 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGGGG CTCGCGAGGA GGAGTTCTCG CGTTATGTCA AGGAGGCCAG GCCGGGGCTG 
CGGCGGACGG CTTTTCTGCT CTCGTCGGAC TGGTTCGAGG CCGACGATCT GGTGCAGCGG
GCGTTGATCG CGATTCATGG GCGCTGGGAG AGCCTTGAGC ATCGTGATCG GATCACGGGG
TACGCGCGCA CGATCATCAT TCGGATGATC ATCAGTGATC GCCGGTCTCA TCGGTGGTCG
CGTGAGGCGT TGGCGGAGGC GCTTCCGGAG CCGGAGCCGG CCGGGGATCC GTACGCGCTG
CTGGGCGACC GCCTGGTGTT GATGAGGGCG TTGGCGGCGC TGGGGCCCCG GCAGCGGGCG
GTGGTCGTCC TGCGGTACTG GGAGGACCGC AGCGTGGAGG AGACCGCGCT GGCGATGGGG
AGCGGGGGCT CGACGGTGCG CAGCCAGACC GCGCGCGCGT TGAGCACGTT GCGTTCGGTG
CTGCGGGGCG AGTGA
 
Protein sequence
MAGAREEEFS RYVKEARPGL RRTAFLLSSD WFEADDLVQR ALIAIHGRWE SLEHRDRITG 
YARTIIIRMI ISDRRSHRWS REALAEALPE PEPAGDPYAL LGDRLVLMRA LAALGPRQRA
VVVLRYWEDR SVEETALAMG SGGSTVRSQT ARALSTLRSV LRGE