Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6992 |
Symbol | |
ID | 8670302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 7709498 |
End bp | 7711153 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Choline dehydrogenase and related flavoprotein- like protein |
Protein accession | YP_003342435 |
Protein GI | 271968239 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.175561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0479417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCA CCGAACGCAC CGACGTCCTC GTGGTCGGAA GCGGCTTCGG CGGCGCGATC GCGGCCTACC ACCTTGCCGC CGGCGGCGCG CGGGTCGTGG TGCTCGAACG CGGGCCCTGG CTGACGGGAA ACGACTTCGA CCACGACTTC AAGCTCGGAT CGTCCTACAC GCGGGCCTTC GACTTCACCG TGGGCGACGG CATGAGCGTG CTCGGCGGCA ACTGCGTGGG CGGCGGCAGC GTCGTCTACT TCGCCGCGAT GCCCCGCGCG CCGCGCTTCG TCTTCGAACG CCACGGCAGC ATCGGCAGGC GGATGTGGCC CTCGGCCGTC AGTCGCGACA CCCTTGAGCC GTGGTACGAC CGGGTGGAGG AGTCGATCCC GGTCACCAAG CAGGAGTGGA GCGACGTCAG CTACGCCGGA GGGCTGTGGG CCGCCGCGTG CAACCACGCG GGCCGTACGG CCAACCCCCT CCCGAGCGCC ATCGACAACA GCAAGTGCGC CAACTGCAAC TGGATGATGG CCGGCTGCCG CTTCGACGCC AAGCGGTCCC TGCTGTTCAA CTACCTGCCG GCCGCGCTCG CGCACGGCGC GGAGGTCCGG CCGCTGCACG AGGTGCAGCA CATCTCGCGG ACCGACGACG GCGACTACCG GGTGCACTAC AACGTCGTCG ACGACGAGGA CTACCGGATC CAGGCGGGCA GCGGCACGAT CGACGCCAAG ATCATCGTTC TCGCGGCCGG CGCCGGCGCC ACCCCCGTCA TCCTGCAGCG CAGCGAGGCG ACGCTCGGCA CGATGCCGAA CGCCGTGGGC AGATACTTCT CGGGCAACGG CGAGCGGCTC AACACCGCCG TCTTCAACGA GGACAAGGTG CGTGAGGTTC TCGGCCTGAG CCGGGGGGAC GGCCTGGCCT ACGAGGCCAA CCAGATCGGC AAGGGGCCGA CCGTGGCCAG CTGGGACCGT CTCGACGGCT CGCTGCCGGA GTACTCCCGC TTCTCGCTGG AGCAGCTCTA CTTCCCGCCC GGCCTCGGCA CCATCCTCGC CCAGGTGCCC GGCGCGACCG GCCCGAGCTG GTTCGGCGTG GACAAGAAGG AGCTCCTCAA GCGCTGGCGC TCCTGGCTGA TCATCTTCCA GATGACCGAG GACGACAACG AGGGGGTGTT CGGCCCGCCC CCCGCCACCG GCAACGCCGA CCGGATCTCG CAGCAGATGC TCGGAGTCGG CAGGCTCCGG TACAACCCGA CCGCCAACAC GCTGCGCGGC TGGGCCGAGG CGGACGCCGA GGTGAAGGAC ATCCTGGAAC GCGACGGGCT GGCCGAGGTG GCGGCGTGGA CCAACGACGT GGTCGGCGCC TACACCGTGC ACCCGCTGGC CTCCTGCCGT ATCGGCGACG ATCCGGACAC CTCCGCGCTC GACGACCGTA ACGAGCTGCG CGGACACCCC GGAATCTTCG TCACCGACGG CTCCGCCGTA CCGGGGGCGC TCACCGTCAA CCCGGCGATG ACCATCGCCG CGCTCGCCGA GCGCGCCGTC CCCGGCATCG TGCAGGCGGC ACAGCAGCGG GGCGTGAACG TCACGTACGG CGCGCCGTCG CCGGACGGAG CCATCAGCGG GCGGCAGGGA GCGGCCCGGC TGGTGCCCAC CCTGCTGCAC AGGTAG
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Protein sequence | MTSTERTDVL VVGSGFGGAI AAYHLAAGGA RVVVLERGPW LTGNDFDHDF KLGSSYTRAF DFTVGDGMSV LGGNCVGGGS VVYFAAMPRA PRFVFERHGS IGRRMWPSAV SRDTLEPWYD RVEESIPVTK QEWSDVSYAG GLWAAACNHA GRTANPLPSA IDNSKCANCN WMMAGCRFDA KRSLLFNYLP AALAHGAEVR PLHEVQHISR TDDGDYRVHY NVVDDEDYRI QAGSGTIDAK IIVLAAGAGA TPVILQRSEA TLGTMPNAVG RYFSGNGERL NTAVFNEDKV REVLGLSRGD GLAYEANQIG KGPTVASWDR LDGSLPEYSR FSLEQLYFPP GLGTILAQVP GATGPSWFGV DKKELLKRWR SWLIIFQMTE DDNEGVFGPP PATGNADRIS QQMLGVGRLR YNPTANTLRG WAEADAEVKD ILERDGLAEV AAWTNDVVGA YTVHPLASCR IGDDPDTSAL DDRNELRGHP GIFVTDGSAV PGALTVNPAM TIAALAERAV PGIVQAAQQR GVNVTYGAPS PDGAISGRQG AARLVPTLLH R
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