Gene Sros_6964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6964 
Symbol 
ID8670274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7675270 
End bp7676931 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content70% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003342408 
Protein GI271968212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.228058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCTG GCGAAGTACC GACCAAAGCT GGACGGCGGG AGTGGCTTGG GCTGGCGGTG 
CTTGCCCTGC CCACTTTCGT CGTAGCCATC GACCTGTTCG TACTGTTACT CGCTCTGCCG
AACCTGGCCA CCGACCTGGG TGCGAACAGC ACCCAGCAGC TGTGGATCAT GGACATGTAC
GGCTTCCTGC TCGCCGGGTT CCTCGTCACG ATGGGTACCC TCGGCGACCG GATCGGCCGC
CGCAAGCTGC TCCTCATCGG CGCGGCCGCC TTCGGCGTGG CCTCGCTGCT GACCGCCTAC
TCCACGAACC CGGGCATGCT GATCGTCTCC CGCGCGCTGC TGGGCGTCGC CGGAGCCACC
CTGGGCCCGT CCTGCCTGGC GCTGATCGTC ACCATGTTCC AGGACGCCAA GCAGCGGGCT
GCCGCCTTCG GCGTGTGGGG CGGCACCTTC ACCCTGGGTG CACTGCTGGG CCCGGTCATC
GGCGGCGTGC TGCTGACCAA CTTCTGGTGG GGTTCGGTGT TCCTGCTGGG CGTGCCGGTC
ATGGTGATCG TGCTCATCGC GGGTCCGAAG CTGCTGCCCG AGTTCCGTAA CAGCCAGGCC
GGCCGGCTCG ACCTGACCAG CGTGGCCCTG TCCCTCGTCA GCATGCTGGC GCTGGTGTAC
GGGATCAAGC AGCTGGTCCG CGACGGCTGG GACGTGCTGC CCGTCGTGGC GGTGGTGGTC
GGCCTGGTGG CCGGAGTGGC GTTCGTCCGC CGCCAGAACC GCCTGACCAA CCCGCTGCTG
GACCTGCAGC TGTTCAAGAA CCGCGCCGTC GGCACCGCGC TGATCGGTCA GCTGTCCTAC
AGCAGCACCG GCGGCGGCAT GATGCTGTTC ATGATGTTCT ACCTGCAGCT GGTGCAGGGA
ATGTCCACAC TGCAGGCGGG TCTGGCGCTG ATCCCCGGAA TGGCCGCGGC GACCCTGGGC
TTCCAGGTCG GTCCCAAACT GGCCAACCGG TTCCGCCCCG CCTACGTCAT CGCCGCCGGC
ATGGCCGGCA TCGTGGCCGT GCTGCTGGTC TTCACCCAGG TCGGCGTCAC CAGCGGAACC
GCCACCCTGA TCATCGGCTT CGCCATCCTG TCCTTCTGCG GCGCTCCGCT GATCGCGCTG
GGCACCAACC TGGTGGTCGG CTCGGCCCCG CCGGAGAAGG CGGGCTCGGC CGGGTCCCTC
ACCCAGCTGA GCACCGAGTT CGGCGGCACC CTGGGCATCG CCGTCCTCGG CACCATCGGC
ACCGCCGTCT ACCGCAACCA GATCGCCGAC ACCCTGCCGG CCGGCATCCC GGCTCCGGCG
GCCGCCGCGG CCGGCGACAG CCTCGCCGCG GGCACCGCCG CCGCCAGCCA GCTGCCCGAG
CCCGTGGCGA CCTCGCTGCT GACCCCCGCC TACCAGGCCC TCGTCGACGC CCTGCACTCC
GTCTCGATCA TCGGCGCCGT CCTGATCGGC GTCGTGGCCA TCCTGGTCGC CGTCCGGCTC
AGGCACGTGC CCCCCGTCGG CCAGGCGGCT CCCCCCGCCG AACAGGCTCC CGCCGCCGAA
CAGGCTCCTG CCGCCGAAGG TGAGGACACG GCCCTCGTAA ACGCCGGCGG ATCGGCCTCG
ACGGTGGATG ATAGAGCGGC TGTCAATAAC TCCTCTATTT AG
 
Protein sequence
MTAGEVPTKA GRREWLGLAV LALPTFVVAI DLFVLLLALP NLATDLGANS TQQLWIMDMY 
GFLLAGFLVT MGTLGDRIGR RKLLLIGAAA FGVASLLTAY STNPGMLIVS RALLGVAGAT
LGPSCLALIV TMFQDAKQRA AAFGVWGGTF TLGALLGPVI GGVLLTNFWW GSVFLLGVPV
MVIVLIAGPK LLPEFRNSQA GRLDLTSVAL SLVSMLALVY GIKQLVRDGW DVLPVVAVVV
GLVAGVAFVR RQNRLTNPLL DLQLFKNRAV GTALIGQLSY SSTGGGMMLF MMFYLQLVQG
MSTLQAGLAL IPGMAAATLG FQVGPKLANR FRPAYVIAAG MAGIVAVLLV FTQVGVTSGT
ATLIIGFAIL SFCGAPLIAL GTNLVVGSAP PEKAGSAGSL TQLSTEFGGT LGIAVLGTIG
TAVYRNQIAD TLPAGIPAPA AAAAGDSLAA GTAAASQLPE PVATSLLTPA YQALVDALHS
VSIIGAVLIG VVAILVAVRL RHVPPVGQAA PPAEQAPAAE QAPAAEGEDT ALVNAGGSAS
TVDDRAAVNN SSI