Gene Sros_6926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6926 
Symbol 
ID8670236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7636506 
End bp7638392 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content71% 
IMG OID 
ProductATP-dependent DNA helicase 
Protein accessionYP_003342372 
Protein GI271968176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0650469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCTC CCGTGAGCGG TCCCGAGGTG AGCGACGCGC TGCGAGTGCT GCACCGCGTC 
TTCGGCTACG ACTCGTTCCG GGAAGGGCAG CAAGAGATCA TCGACCACGT CGTCGCCGGC
GGTGACGCGC TGGTGCTGAT GCCGACCGGT GGCGGCAAGT CGCTGTGCTA CCAGATCCCC
GCCCTCGTGC GGGACGGCGT CGGCGTCGTC GTCTCACCGC TCATCGCCCT CATGCAGGAC
CAGGTCGACG CCCTGACGGC CCTGGGCGTG CGGGCGGGGT TCCTCAACTC CACGCAGGAC
CACGACGAGC GCCGTCAGGT CGAGTCCGCC TTCCTGGCGG GTGAGCTGGA CCTGCTCTAC
CTGGCGCCGG AGCGCCTGCG GGTCGATTCG ACGCTGCGGC TGCTCGACCG CGGCACGATC
TCCCTGTTCG CCATCGACGA GGCGCACTGC GTGGCCCAGT GGGGGCATGA CTTCCGGCCC
GACTACCTCG CGCTGTCCGC GCTGCACGAG CGCTGGCCCG ACGTGCCCCG CATCGCCCTG
ACGGCGACCG CCACCGAGGC CACCCACGCC GAGATCGCCT CCCGGCTGAA CCTGGAGGAA
GCCCGCCACT TCGTGTCGAG CTTCGACCGC CCGAACATCC AGTACCGCAT CGCGCCGAAG
AACGAGCCCA AGCGGCAACT GCTCAAGCTG CTGCGCACCG AGCACCCCGG GGACGCCGGC
ATCGTCTACT GCCTGTCGCG CTCCTCGGTC GAGAAGACCG CCGAGTTCCT GGTGCAGAAC
GGCATCTCGG CGCTGCCCTA CCACGCGGGG CTCGACGCGC GCACCCGGGC GGCCAACCAG
GCGCGGTTCC TGCGGGAGGA CGGCCTCGTC ATGGTCGCCA CCATCGCGTT CGGCATGGGC
ATCGACAAAC CCGACGTGCG GTTCGTCGCC CATCTCGATC TGCCCAAGTC CGTCGAGGGC
TACTACCAGG AGACCGGCCG GGCCGGACGT GACGGCCTCC CCTCCGTCGC CTGGCTGGCC
TACGGGCTCC AGGACGTCGT GCAGCAGCGC AAGATGATCG ACACCTCCGA GGGCGACGAG
ACCCACCGGC GCCGCCTGGG CACCCATCTC GACGCCATGC TCGCCCTCTG CGAGGCGGTC
GAGTGCCGCC GCGTGCGCCT GCTCGCCTAC TTCGGCCAGG ACAGCACGGC GTGCGGCAAC
TGCGACACGT GCCTGACGCC GCCGGAGTCG TGGGACGGCA CGATCGCCGC CCAGAAACTC
CTGTCGACCG TGCTCAGGCT CCTGCGCGAG CGGCGCCAGA AGTTCGGCGC GGGCCAGATC
ATCGACATCC TGCTCGGCAG GAAGACGCCG AAGGTCACCC AGTTCGACCA CCACTCCCTG
ACGGTGTTCG GCATCGGCAC GGAGCTGGGC GAGGCCGAGT GGCGCGGCGT GGTGCGCCAG
CTGCTGGCCC AGGGCCTGCT GACCGTCGAG GGCGACTACG GCACGCTGCT GCTCACCGAG
GCGAGCGCCG AGGTGCTGAG CCGGCAGCGC CAGGTCCTGC TGCGGCGTGA GCCCGAGCGG
GCGGCGCGCA CCAGATCCGA GCCGTCGGCA CGGGCCGGTG GGGCCCGCCG CGCCACCCCC
GCGGACCTGC CCGAGGAGGC CGTGCCGGTG TTCGAGCGGC TCCGCGCCTG GCGCGCGGCC
ACCGCCAAGG AGCAGGGCGT GCCCGCCTAC GTGATCTTCC ACGACGCGAC CCTGCGCGAG
ATCGCGACCG GGGTCCCGTC CTCCCTGGCC GAGCTGGGAG AGGTGAGCGG TGTCGGCGAG
AACAAACTGG CGAAGTACGG CCGGCAGATC CTGGACACCC TCGCGCAGGA CGCCGTCGAG
CCCGATCAGG CTCTCATCTT CCCCTGA
 
Protein sequence
MVSPVSGPEV SDALRVLHRV FGYDSFREGQ QEIIDHVVAG GDALVLMPTG GGKSLCYQIP 
ALVRDGVGVV VSPLIALMQD QVDALTALGV RAGFLNSTQD HDERRQVESA FLAGELDLLY
LAPERLRVDS TLRLLDRGTI SLFAIDEAHC VAQWGHDFRP DYLALSALHE RWPDVPRIAL
TATATEATHA EIASRLNLEE ARHFVSSFDR PNIQYRIAPK NEPKRQLLKL LRTEHPGDAG
IVYCLSRSSV EKTAEFLVQN GISALPYHAG LDARTRAANQ ARFLREDGLV MVATIAFGMG
IDKPDVRFVA HLDLPKSVEG YYQETGRAGR DGLPSVAWLA YGLQDVVQQR KMIDTSEGDE
THRRRLGTHL DAMLALCEAV ECRRVRLLAY FGQDSTACGN CDTCLTPPES WDGTIAAQKL
LSTVLRLLRE RRQKFGAGQI IDILLGRKTP KVTQFDHHSL TVFGIGTELG EAEWRGVVRQ
LLAQGLLTVE GDYGTLLLTE ASAEVLSRQR QVLLRREPER AARTRSEPSA RAGGARRATP
ADLPEEAVPV FERLRAWRAA TAKEQGVPAY VIFHDATLRE IATGVPSSLA ELGEVSGVGE
NKLAKYGRQI LDTLAQDAVE PDQALIFP