| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6913 |
|---|
| Symbol | |
|---|
| ID | 8670223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 7618647 |
|---|
| End bp | 7619198 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003342359 |
|---|
| Protein GI | 271968163 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.128918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGCG GCACACGCTC GGGAACCCGT GAGGAGATCC TCGACGCGGC GGCCCGTCTC
TTCGCCGCGA CCGGTTTCAA GGGGACGTCG CTGCAGGACA TCGCCGGCGA GGTGGGCTGC
TCGAAGGCCG CGTTGCTGTA TCACTTCGAC GGCAAGGACG CGATCCTCAC CGAACTGCTG
GCGCCGCCCC TCGAGGCGCT GGCGACGCTC GACGCCCGGC TGGCCGGTCT CGGTGACGAC
GCCGTCCAGC TCGCGGCCGT CGAGGGATAC GTGGACCTCG TGATGCGCTT CCGGCGGGAG
GTCACCGTCC TGTACGACGA CATGCCCGCG CTGCTCCAGC GCCCCGCCTT CGCCGGCGTC
CAGGAGATGT CGGACCGGCT TCTCGACGCG CTGGCCGCCC GTTCCCCGGA TCCGGCGGCC
CGCATCACCG CGCTGATGGT GCTCGGCTCC GTCCCCGTCG TCTGCATGAA ACCCACCGAG
ATCGGCGACG ACGAGCTGCG CTCCATCCTG ACGCGGAGCG CGGCCCGGAC CCTGGACCTC
CGCCGAGCGT GA
|
|---|
| Protein sequence | MSRGTRSGTR EEILDAAARL FAATGFKGTS LQDIAGEVGC SKAALLYHFD GKDAILTELL
APPLEALATL DARLAGLGDD AVQLAAVEGY VDLVMRFRRE VTVLYDDMPA LLQRPAFAGV
QEMSDRLLDA LAARSPDPAA RITALMVLGS VPVVCMKPTE IGDDELRSIL TRSAARTLDL
RRA
|
|---|
| |