| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6889 |
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| Symbol | |
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| ID | 8670199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | - |
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| Start bp | 7586036 |
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| End bp | 7589908 |
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| Gene Length | 3873 bp |
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| Protein Length | 1290 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | ATP-dependent RNA helicase HrpA |
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| Protein accession | YP_003342335 |
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| Protein GI | 271968139 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.5003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACGC CTCCGTTGAC ATCTCCACTC GCCGACCTCC ACGCACGCCT GCCCGAGCTC
ACGCTGCGCG ACCAGCGACG GCTGCGGCGC AGGCTCGACG GCGCGCGCAA GGTCAGAAAC
CGCGCCACGC AGCAGAAGAT CGCCGCGGAG ATCACCGCCG ACATCGAGAA GGCCGAGCGC
CGGGTGGCCG CCCGCAGGGC CGGGGTGCCG GTGGTCACCT ACCCGGAGGC GCTGCCGGTC
AGCCAGCGCA AGGACGACAT CCTGGAGGCG ATCCGCGACC ATCAGGTCGT GATCGTCGCC
GGCGAGACCG GTTCCGGCAA GACGACCCAG CTCCCGAAGA TCTGCCTGGA GCTGGGCCGG
GGCGTCCGGG GCCTGATCGG TCACACCCAG CCTCGCAGGA TCGCCGCCAG GACCGTGGCC
GAGCGCGTCG CCGAGGAGCT CGACACCCAG CTCGGCGACG CCGTGGGCTA CAAGGTGCGC
TTCACCGACC AGGTGAGCGA CGGCACGCTC GTCAAGGTGA TGACCGACGG CATCCTCCTG
GCCGAGCTGC AGACCGACCG CGACCTCGAC CAGTACGACA CGCTGATCAT CGACGAGGCG
CACGAGCGCA GCCTCAACAT CGACTTCATC CTCGGCTACC TCAAGCAGCT CCTCCCGAAG
CGGCCGGATC TCAAGATCAT CATTACCTCG GCCACCATCG ACCCGGAGCG CTTCTCCCAG
CACTTCGGCG ACGCCCCGAT CGTCGAGGTC TCCGGCCGGA CCTATCCGGT CGAGGTCCGC
TACCGTCCGG TCGCCGAGGA CGACGACCAG ATCCAGGCGA TCAGCAACGC CGTGGACGAG
CTGTGCGCCG AGGGGCCGGG CGACATCCTG GTCTTCCTCA GCGGCGAACG CGAGATCCGC
GACACCGCCG ACGCGCTGTC CAAACGCAAG GACGCCGAGA TCCTCCCGCT GTACGCCCGG
CTGTCGGCGG CCGAGCAGCA CAAGGTCTTC CAGCGGCACT CCGGCCGCCG GGTCGTGCTG
GCCACCAATG TGGCCGAGAC CTCGCTGACC GTGCCCGGCA TCAAATACGT GGTCGACCCC
GGGTTCGCCC GCATCTCCCG CTACAGCCAC CGCACCAAGG TCCAGCGCCT GCCGATCGAG
GCGATCTCCC AGGCCTCGGC CAACCAGCGC AAGGGCCGCT GCGGCCGTGT CTCCGAAGGC
GTCTGCATCC GGCTGTACGA GGAGGACGAC TTCCTCACCC GGCAGGAGTT CACCGACCCG
GAGATCCTGC GCACCAACCT CGCCTCGGTC ATCCTGCAGA TGACCTCCAT CGGCCTGGGC
GACATCGGGG CCTTCCCCTT CGTCGAGCCG CCGGACCAGC GCCAGGTCAA GGACGGCTAC
GACCTGCTCC AGGAGCTGGG CGCCTTCGAC CAGGCCAGGC AGATGACCCC GCTCGGCCGC
AAGCTGGCCG GCCTGCCGGT GGACCCCCGC CTGGCCCGCA TGGTGCTGGA GGCCGACCAC
AACGGCTGCG TCCGCGAGGT CATGGTGATC GCCGCGGCGC TGTCCATCCA GGACCCGCGC
GAGCGGCCGG CCGACAAGCA GCAGGCCGCC GACGACAAGC ACCGCCGCTT CGCCGACAAG
GAGTCGGACT TCGTCTCCTA CCTGAACCTG TGGGAATACC TCCAGGAGCA GCAGAAGGAG
CTGTCCTCCA GCGCGTTCCG GCGCCTGTGC AAGTCCGAGT TCCTCAACTA CCTGCGCGTA
CGCGAGTGGC AGGACGTCTA CAGCCAGCTC CGCCAGATGT CGAAGTCCCT CGGTGTGACG
CTGAACAGCA CCCCCGGCGA CGAGCAGAAG ATCCACTTCT CCCTGCTGTC CGGCCTGCTG
TCCCACGTCG GCGTCAAGGA CATCGACAAG AAGACGGCCA ATGACGGCCC CCGCCGTCCC
GTCACCGAAT ACATCGGTGC CCGCAACGCC CGCTTCGCCA TCTTCCCCGG CTCCGCGCTG
GCCAAAAAGC AGCCGCTGTG GGTCATGTCC GCCGAGCTGG TGGAGACCTC CCGCCTCTGG
GCCCGGGTCA ACGCCAAGAT CGAGCCCGAG TGGGTCGAGC CGCTCGCCCA GCACCTGATC
AAACGCACCT ACTCCGAGCC GCACTGGGAG AAGAACCAGG GCGCGGTGAT GGCCTACGAG
AAGGTCACGC TGTACGGCGT GCCGATCGTG GTCCAGCGGA AGATCAACTA CGGCCGCATC
GACCCCGAGC TGAGCCGCGA GCTGTTCATC CGGCACGCCC TGGTCGAGGG CGACTGGGAG
ACCCACCACG CGTTCTTCAA GGAGAACCGG AAGCTTCTCG AAGAGGTCGA GGAGCTGGAG
GAACGGGCCC GCCGCCGCGA CATCCTCGTC GACGACGAGA CGCTGTTCGA CTTCTACGAC
CAGCGCGTCC CCCAGGACGT CGTCTCCGGG CGCCACTTCG ACTCCTGGTG GAAGAAGACC
AGGACCGACC AGCCCGATCT GCTCAGCTTC GAGAAGTCGA TGCTGATCAG CGAGTCGGCG
GGTGACGTCA GCCAGCGCGA CTACCCCGAC GTGTGGCGCC AGGGCGGCCT GCGCTTCCCG
CTGACCTACC AGTTCGAGCC GGGCACCGAC GCCGACGGCG TCACCGCGCA CATCCCGCTC
GCCCTGCTCA ACCAGGTGAA CGTCGAAGGC TTCGACTGGC AGATCCCCGG CCTGCGCGAG
GAGCTCCTCA CCGCGCTCAT CCGGGCCCTG CCCAAGAACA TCCGGCGCAA CTTCGTGCCC
GCCCCCAACT ACGCCAAGCA GGTGCTCCAG CGGGCGGAGC CCACCCAGGA GCCGCTGCTC
GCGGTGCTGG AGCGGGAGCT GCTCAACCTC ACCGGCATCC AGGTGCCGCG CGAGGCGTGG
CAGTCCGACC TCGTCCCCGA CCACCTGAAG ATCACCTTCC GGGTGGTCGA CGGCCGCAAG
CACAAGCTGG CCGAGAGCAA GGACCTGGCC GCCCTCAAAC GGCGGCTCGC GCCCAAGCTC
CGCCAGACCC TCTCAAGGGC CGCCGACGGG CTGGAGAAGT CGGGCCTGAC CACGTGGAAC
GTGGGGGAGC TGCCCAAGAC CTTCGAGCAG CGCCGGATGA AGGCCTATCC GGCGCTGGCC
GACGAGGGCG CCACGGTGGC CGTGCGGATG TTCGAGACCG AGGCCGAGCA GCGCCGTGCC
ATGTGGGAGG GCACCCGCAG GCTGCTGCTG CTCAACACCC CCTCCCCGGC CAAGTGGGTG
CTGGGCCGTC TGAACAACCA GGCCAAACTC GCCCTCAGCC GCAGCCCGCA CGCGGGTGCC
ACCGCCCTGT TCGACGACTG CATCGCCTGC GCCGCCGACG AGCTGATGAG CCAGTACGGC
GGGCCGGTCT GGGACCAGTC CGCCTTCACC GCCCTGCACG ACAAGGTCCG CGCCGAGCTC
TTCGACACCA CCGCCGAGGC GGTCGCCAGA GTGGAGGGCA TCCTCCGGGT CTGGCACTCG
GTCGCCACCC TCCTGCCCGA GGCCCGTTCC ACCCCCGCGA TCGAGGACAT CCGCGACCAG
GTCGCCGACC TGGTCTACCC CGGCTTCGTC ACCGACACCG GCTACAAGCG CCTGCCGGAC
CTGCTCCGCT ACCTCAAGGC GGCCGAGCGG CGGCTGGAGA AGCTGCCCGA CGACCGGCTC
CGCGACGAGG AGCGGATGCA CCGGGTCCAT GACATCGAGG ACGACTACCA CGACCTGGTC
GAGAAGCTTC CCCCCGCCCG CCGTTCCGAC GACGACGTCC GCCAGATCCG CTGGATGATC
CAGGAACTCA GGGTCAGCTA CTTCGCCCAG ACCCTCGGCA CCCCGTACTC GATCTCCGAC
AAGCGCATCC GCAAGGCCAT GGACAACCTG TAG
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| Protein sequence | MGTPPLTSPL ADLHARLPEL TLRDQRRLRR RLDGARKVRN RATQQKIAAE ITADIEKAER
RVAARRAGVP VVTYPEALPV SQRKDDILEA IRDHQVVIVA GETGSGKTTQ LPKICLELGR
GVRGLIGHTQ PRRIAARTVA ERVAEELDTQ LGDAVGYKVR FTDQVSDGTL VKVMTDGILL
AELQTDRDLD QYDTLIIDEA HERSLNIDFI LGYLKQLLPK RPDLKIIITS ATIDPERFSQ
HFGDAPIVEV SGRTYPVEVR YRPVAEDDDQ IQAISNAVDE LCAEGPGDIL VFLSGEREIR
DTADALSKRK DAEILPLYAR LSAAEQHKVF QRHSGRRVVL ATNVAETSLT VPGIKYVVDP
GFARISRYSH RTKVQRLPIE AISQASANQR KGRCGRVSEG VCIRLYEEDD FLTRQEFTDP
EILRTNLASV ILQMTSIGLG DIGAFPFVEP PDQRQVKDGY DLLQELGAFD QARQMTPLGR
KLAGLPVDPR LARMVLEADH NGCVREVMVI AAALSIQDPR ERPADKQQAA DDKHRRFADK
ESDFVSYLNL WEYLQEQQKE LSSSAFRRLC KSEFLNYLRV REWQDVYSQL RQMSKSLGVT
LNSTPGDEQK IHFSLLSGLL SHVGVKDIDK KTANDGPRRP VTEYIGARNA RFAIFPGSAL
AKKQPLWVMS AELVETSRLW ARVNAKIEPE WVEPLAQHLI KRTYSEPHWE KNQGAVMAYE
KVTLYGVPIV VQRKINYGRI DPELSRELFI RHALVEGDWE THHAFFKENR KLLEEVEELE
ERARRRDILV DDETLFDFYD QRVPQDVVSG RHFDSWWKKT RTDQPDLLSF EKSMLISESA
GDVSQRDYPD VWRQGGLRFP LTYQFEPGTD ADGVTAHIPL ALLNQVNVEG FDWQIPGLRE
ELLTALIRAL PKNIRRNFVP APNYAKQVLQ RAEPTQEPLL AVLERELLNL TGIQVPREAW
QSDLVPDHLK ITFRVVDGRK HKLAESKDLA ALKRRLAPKL RQTLSRAADG LEKSGLTTWN
VGELPKTFEQ RRMKAYPALA DEGATVAVRM FETEAEQRRA MWEGTRRLLL LNTPSPAKWV
LGRLNNQAKL ALSRSPHAGA TALFDDCIAC AADELMSQYG GPVWDQSAFT ALHDKVRAEL
FDTTAEAVAR VEGILRVWHS VATLLPEARS TPAIEDIRDQ VADLVYPGFV TDTGYKRLPD
LLRYLKAAER RLEKLPDDRL RDEERMHRVH DIEDDYHDLV EKLPPARRSD DDVRQIRWMI
QELRVSYFAQ TLGTPYSISD KRIRKAMDNL
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