| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6879 |
|---|
| Symbol | |
|---|
| ID | 8670189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 7576236 |
|---|
| End bp | 7577399 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | IS605 family transposase OrfB |
|---|
| Protein accession | YP_003342326 |
|---|
| Protein GI | 271968130 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.642554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGATG TGAAGCTGGT GGTGCAGGTG AGACTCCTGC CGACGCCTGA GCAGGCGGCG
GCGCTGGCGG CGACTTTGCG CGCGGTCAAC GAGGCGGCCA CCTGGGTCTC GGCGCTCGCC
CACCACCAGC GGGTGTTTCG CAATTACGAC CTGCGCCGGC ACGCCTACGG GCGGATCAAG
GACAACTACG GGCTGGCGGC TCAGGCCGCG CAGCATGTCA TCAAGAAGGT CACTGACGCC
TACGCCACGC TGCACGCCAA TCTCCGCAAC GGACAGGTGG GCAGACCCGG CTCCGCGCGG
CGCGAGCGGG CCTTGGCCAA GCCGATCGTC TTTCGCCCCG GCGCGGCCCA GCCGTTCGAC
GACCGCTGTC TGTCCTGGCG GATGGAGTCG CGGACGGTGT CGATCTGGAC CACGTGCGGG
CGGATGAAGA GCGTGGCGTT CACCGCCTCG GCCGATCAGC TCACGACGTT GGCCGCCTAC
CGCAAGGGCG AATCGGACCT TCTGTACCGC GATGGCAGGT GGTTTTTGAT CGCTACCTGT
GACATTCCCG ACCGGCCAGC CACCACCCCG GACGGATTTT TGGGAGTGGA CCTGGGGATC
GCCAACCTCG CGACCACCAG TGGCGGGGTT CGCCACAGTG GCAGGGCTCT GAACGCGGTC
CGCCACCGTC ACCGCGAGCT GCGCCGCCGC TTGCAGGCCA AGCAGACCAA GTCCGCCAAG
CGGCTGCTGA GGAAACGCCG CCGCAAAGAA GCGCGCTTCG CCGCGGACAC CAACCACACC
ATTGCCAAAC GCATCGTGAC CGAGGCGACA CGCACCGGGC AAGGGATCGC CCTGGAAGAC
CTCCAGGGCA TCCGCGACCG GGTACGGCTC CGTAAGCCCC AGCGGGTCAC GTTGCATTCG
TGGAGCTTCC ACCAGCTCGG CCGGTTCGTC GTTTACAAGG CCCGTCGTGC CGGGGTCGCG
GTGGTGTACG TCGACCCGGC TTATACCTCG CAGGGGTGTT CGGCGTGCGG GCACATCGAC
AGACGCAACC GGCCGGACCA GGAGACCTTC CGCTGTACGT CGTGCGGTTT CGCTGAGCAC
GCCGACGTCA ACGCGGCCCG CAACATCGCC TCGCGCGGTG TGGCGGGCTG GGCAGTGAGT
CACGCTGCCG ACGACGCGGC CTGA
|
|---|
| Protein sequence | MGDVKLVVQV RLLPTPEQAA ALAATLRAVN EAATWVSALA HHQRVFRNYD LRRHAYGRIK
DNYGLAAQAA QHVIKKVTDA YATLHANLRN GQVGRPGSAR RERALAKPIV FRPGAAQPFD
DRCLSWRMES RTVSIWTTCG RMKSVAFTAS ADQLTTLAAY RKGESDLLYR DGRWFLIATC
DIPDRPATTP DGFLGVDLGI ANLATTSGGV RHSGRALNAV RHRHRELRRR LQAKQTKSAK
RLLRKRRRKE ARFAADTNHT IAKRIVTEAT RTGQGIALED LQGIRDRVRL RKPQRVTLHS
WSFHQLGRFV VYKARRAGVA VVYVDPAYTS QGCSACGHID RRNRPDQETF RCTSCGFAEH
ADVNAARNIA SRGVAGWAVS HAADDAA
|
|---|
| |