| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6871 |
|---|
| Symbol | |
|---|
| ID | 8670181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7566595 |
|---|
| End bp | 7569159 |
|---|
| Gene Length | 2565 bp |
|---|
| Protein Length | 854 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003342320 |
|---|
| Protein GI | 271968124 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.361895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGGC CGTCAAACGT GCCTGATCGT CGTGGTTCCC GACCGTCGAG GCGGTCGATC
TCGCTGGCGG CCCCCGCCGC CGCGGGAATC GCCGCCGCGG TGGCCAGCAT CCTGGCCACG
TCGCTGGACG TCTGGGACCT GCCCACCGAG GCCAAGGTCG GCGTCACCGT GCTCGCCGCC
CTCCTGGTCG GCCTGCTCAC CTGGGCGACC GCCGGCACCC GGGCGGAGAA GCCCGCAGCG
GGAGACGGCC CGTCCTGGCG CCCGCCCGAC CAGTGGCCCC CGGTCTCCGC GCACTTCACC
GGGCGGACCG AGTCGCTGGC CGAGCTGCGC CGGGTGTTCG CCGGGCACCA ACGCTCCCGT
GGCCGCGACG GGGACAACTC GCCGCTGGTC GTCTCGGTGT ACGGCAGAGG CGGGGTGGGC
AAGTCCATGC TCATCGCCAG GTTCGGGCAC GAGGTCGCCG ACCGCTTCCC CGACGGGCGC
CTCTACGCCG ACCTGCGCGG CGCGGTGGAG GCGCCGATCC AGGCCGAGGA GGTGCTGATC
GGCTTCCTGC GGGCGCTGGG GGTGCGGCTC ACCACCGACC CCGGCGGCCC GGCCGAACTG
CGCAAGCTCT GGCTGACCTG GACCAAGGGC AAGCGCATCC TGATCGGCCT GGACAACGCC
CAGGACGGAG ACCAGGTCAA GGACCTGATC CCGGCCGAGC CGGGCTGCGC GGTCATGATC
ACATCACGGC AGCCGCTGTT CCTGCTCAAC ACCTACGACA AGCAGCTCTC GGTGTTCAGC
GAGGCGCAGG GCGTGGAACT GCTGGCCCGG CTGGCCGGGG ACGACCGGGT CGCCGCCGAC
CTGGAGTCGG CCCAGGAGAT CGTCCGGATG TGCGACCACC TGCCGCTGGC CATCAGCATC
TGCGGCGGCC GCCTGGCGAC CCGGGAGAAC TGGACCCTGC GCGAGCTCGC CGACCGGCTG
AGGGACGAGC GCCGCCGCCT GGACCACCTC GAACTCGCCC GCAGGCTCGA CAAGAGCGTG
CGCGCCTCGC TCCAGCTCAG CTACGACGAC TGCACCGGCC TCCAGCGCCG GCTGCTGCGC
CTGCTCAGCC TCCTCACCGC CCCCGACATG CCCGGCTGGG TGGCGGGGGA GCTGCTGGCC
ACCTCCGAGC TGGACGGGGC CGACCAGCTT GAGGCGCTCA TCGACACCCA GCTCGCCGAG
TGCTCGGGCA TCGACTTCTC CGGCGTGATG CGCTACCGGC TGCACGACCT GGTCCGCATC
TTCGCCCGCG AGCTGGCCGT CTCCGACGAG GACGACGGTC ACCGCAGGGC GGCCATCGAG
CGGGTCCTGT CCGGCTACCG GCGCCGAGCC GAGACCGCGG CCATGGCCCG CTGGCCCCAG
GACTGGGGCC GCAGCGGCAG GAACGCCGAC CCGGCGACCA CGACGGTCGC CCAGGCGTCG
GCGGCCGACT GGCTCAACGC CGAGCGGCGG ACCCTGGTCG CCATGATCCA CCAGGCCCGC
GCCTTGGAGA TGTGGGATCT GGCCTGGGGC CTGGGCCGCG CCTTCTGCTC GCTCTGCCAC
TCCCTGCGGG CCTACTGGTC CGACTGGCGG GCGGTCGCCG AGATCGTGTG CGAGGCCGCG
GCCCACATGG ACGACCGGCG GGCCCTGGGC ATCGCGCTGC TGGACCGGGC GGCGGTGAGC
GGCGGGCAGG GCAGCCACCA GGTCGCCAGG GCGGACGCCG AGCGCGCGCT GGAGATCTTC
ACCGACCTGG GCGAGTCGTG GTGGTCCGCG CGGGCGATGC GGGCGGTCGG CATGGCCCTG
TTCAGCGACG GCAACCTCGA CCCGGGCCAG GGCTACCTCA TCGAGGCGAT CACGGCCTTC
AAGGGGGAGG GCGACCGCTG GTGGTCGGCC AGGACGCAGC GCAACCTGGC CGAGCTCCGG
CTCGCCCAGC GCAGGCCCGA GCAGGCCAGG AAGCTGCTGG AGGACGCCCT GGAGGTCTTC
AAGTACGACC GTAACCGCTA CTCCGAGGCG CAGACCCTGC GCGCCTACGG GGAAGTGCTC
GGCGCGACCG CGCGGACGCT GCACGCCCAG GGGGAGACCA GGGCCGCCGC GGAGGACTTC
ACGCGGGCCG GGTTCAGCCT GGACCGGGCG GCGGAGACGT TCCGGCTCAG AGGCGAGCTC
TGGGAGGAGG CCAGGTGCCT GCGCGCGGCC GGTGAGGTCG GCAATCCCGC CGACGGACTC
CGCGAACTGG CCTACGTACG GCGGGCCACG GAGATGCTGG CCGCCCTCGG CGACTCCTGG
GGCGTGGCCC GGAGCGAGCT GTCGGCGGGA CGCGCACACA GCCGGCTGGG CCGTACCCGG
GAGGCGCGGG AGTCGCTGGA GCGGGCCGTG CACGCCTTCG AGGAGCTGGG TGACCGCTGG
TGGATGGCCC GGAGCCTGCG CTACCTCGGC GAGGCGCATC TGGAGGCGGG TGACCAGGAG
GCGGCGCTCC CCCCGCTCAG GCAGGCCCAG GACATCTACC GGAGCCTGGG CAACCAGGCC
GGGATGGGCC GCACCCTCGA ACTCCTGCGC CGCGCGGGGG AGTGA
|
|---|
| Protein sequence | MPGPSNVPDR RGSRPSRRSI SLAAPAAAGI AAAVASILAT SLDVWDLPTE AKVGVTVLAA
LLVGLLTWAT AGTRAEKPAA GDGPSWRPPD QWPPVSAHFT GRTESLAELR RVFAGHQRSR
GRDGDNSPLV VSVYGRGGVG KSMLIARFGH EVADRFPDGR LYADLRGAVE APIQAEEVLI
GFLRALGVRL TTDPGGPAEL RKLWLTWTKG KRILIGLDNA QDGDQVKDLI PAEPGCAVMI
TSRQPLFLLN TYDKQLSVFS EAQGVELLAR LAGDDRVAAD LESAQEIVRM CDHLPLAISI
CGGRLATREN WTLRELADRL RDERRRLDHL ELARRLDKSV RASLQLSYDD CTGLQRRLLR
LLSLLTAPDM PGWVAGELLA TSELDGADQL EALIDTQLAE CSGIDFSGVM RYRLHDLVRI
FARELAVSDE DDGHRRAAIE RVLSGYRRRA ETAAMARWPQ DWGRSGRNAD PATTTVAQAS
AADWLNAERR TLVAMIHQAR ALEMWDLAWG LGRAFCSLCH SLRAYWSDWR AVAEIVCEAA
AHMDDRRALG IALLDRAAVS GGQGSHQVAR ADAERALEIF TDLGESWWSA RAMRAVGMAL
FSDGNLDPGQ GYLIEAITAF KGEGDRWWSA RTQRNLAELR LAQRRPEQAR KLLEDALEVF
KYDRNRYSEA QTLRAYGEVL GATARTLHAQ GETRAAAEDF TRAGFSLDRA AETFRLRGEL
WEEARCLRAA GEVGNPADGL RELAYVRRAT EMLAALGDSW GVARSELSAG RAHSRLGRTR
EARESLERAV HAFEELGDRW WMARSLRYLG EAHLEAGDQE AALPPLRQAQ DIYRSLGNQA
GMGRTLELLR RAGE
|
|---|
| |