Gene Sros_6828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6828 
Symbol 
ID8670138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7515994 
End bp7516917 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content73% 
IMG OID 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003342278 
Protein GI271968082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.257842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGG TGTTCGCTCC TCGACCCCTC TTGGGAGCCG TGCTTCTGTT GTCCGTCAGC 
GTGGCCTGGG GGTCGGCTTT CCCGCTGATG AAAGACCTCA TCGCCCGGAT GCCGGTGGCG
GACCTGCTCG CCGAGCGGTA CGGCATCGCG ACGCTCGCCC TGTTCGCGCT CCGGCCGCGC
TGCCTGCGGG GGCTGCCGGA GAGCACCTGG CTGACCGGCC TCCTGCTCGG CCTGCTGTTC
GGCGTGGGCC AGACCGCCCA GGCCGTCGCG CTGCACGACC TGCCGTCATC GGTCTCGGGC
TTCACCGTCG GCTCCTACGT GGTGATCACC CCGGTCCTCG GGCTGGTCCT GCTCGGCGCC
AGGATCTCCG GGCGCACCTG GGGCGCGGTG GCACTCGCGC TGGCCGCGTT GACGGTCTTC
ACCCTCCTGA GCGAGGCCGA GGGCGGCGCC GTCTCCCTGC CCGCGCTGGC CGTCACCCTG
CTGTCGGCGG TGCTGTACGC GGGGCACACG CTGGTGCTGG GAAACTTCGC CGGCGCGCGG
CGGGACGCCT ACGCGGTCAC GGTGATCCAG CTCGGCACGA TCGCGCTCAT GACGGGCGTC
CTCGCCGCGC CGGACGGGCT CACCCTGCCC CGCACGACGG GCGACTGGGC GCTCCTCGGC
CACCTGTCGA TCGTGGCCTG CGCGCTGGGC TTCCTGGCCC GGTCGTACGG CCAGCTCCAT
GTCCCGCCGG TGCCCGCCGC GGTGATCCTG TCGGCCCAGC CGCTCTGGGT GACCGCCCTG
GCCGTCGTGA TGTACGGCGA GCCGCTCACC TGGGCCGTCT TCCTCGGCGG AGGGCTGATC
GCCCTGGCCA TGCTCCTGGT CGTGCTGCCC GGCGGGCTGT TCAGGACAGC ACGTCGAGGG
ACAGGCCCAG CTCCCCCGCG GTAG
 
Protein sequence
MAAVFAPRPL LGAVLLLSVS VAWGSAFPLM KDLIARMPVA DLLAERYGIA TLALFALRPR 
CLRGLPESTW LTGLLLGLLF GVGQTAQAVA LHDLPSSVSG FTVGSYVVIT PVLGLVLLGA
RISGRTWGAV ALALAALTVF TLLSEAEGGA VSLPALAVTL LSAVLYAGHT LVLGNFAGAR
RDAYAVTVIQ LGTIALMTGV LAAPDGLTLP RTTGDWALLG HLSIVACALG FLARSYGQLH
VPPVPAAVIL SAQPLWVTAL AVVMYGEPLT WAVFLGGGLI ALAMLLVVLP GGLFRTARRG
TGPAPPR