| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6790 |
|---|
| Symbol | |
|---|
| ID | 8670099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7477979 |
|---|
| End bp | 7481242 |
|---|
| Gene Length | 3264 bp |
|---|
| Protein Length | 1087 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | ATPase-like protein |
|---|
| Protein accession | YP_003342242 |
|---|
| Protein GI | 271968046 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.22368 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGTTGG ACACGGAAAT GACCTTCGCC ATCCTCGGAC CCCTGGAGAT CCGCCGGTGC
GGTGCGACCG TGGAGATCGC GGGGCAGCGC CTGCGCACCC TCCTCGGCCT GCTGCTTCTC
GACGCCGGCC GGGTCGTGCC CGTCGATCGG CTGATCGCGG GGGTGTGGGA GGACCGCCCG
CCGAACGCGG CGGGAAACGC GCTGCAGGCC CTGATCTCCC GATTACGCGC CGCGCTGGCC
GATCAGCGTG GATTGGTGGA GGCCGACGCG GCCGGCTACC GGCTGGCCGT CGACCCCGGC
CGGGTGGACG CCCACCGGTT CACCCGGCTG GCGGCAGAGG GCCGCGCGGC CCTCGCGGCG
GGCTCCCCGG CCGACGCCGC GACCGCCCTG CACGCCGCGC TCGCGCTGTG GCGCGGGCCC
GCCCTGGCCG ATCTGGCGGG CAACGACACC GTCGCCGCCG CGATCACCAG GCTGGACACG
CTCCGCCTGG CCGCCCTCGA AGACCGGGTC GAGACCGACC TGCTGCTCGG ACGACAGGCC
GAGGCGGCCG CGGAACTGCC CGGCGTGATC GCCGCCCACC CGCTGCGCGA GCGGCTCCGC
GGCCAGTTGA TGCGCGCCCT GTACGGCTCG GGCCGCCACG TCGAGGCGCT GGCCTCCTAC
GAGGACGCCC GCGCGGTCTT CGCCGACCGG CTCGGCGTGG ACCCCTCGCC CGAGCTGGTC
GGCCTCCACC TTTCCATGCT GCGCCGCGAG TGGGCCGAGA ACGGCCTGCG GCTCCCGTCA
CCCGACCGGG ACGGCCGGGG GCTTCCGGTG CCCGCCGAGG TCCCGCGGCG GGGCAACCTG
CCGGCCAGGC TCACCAGCTT CGTCGGCAGG GAACGCGACG TGGCGCGGAC CGCCGAGCTC
CTCGCCGGGC ACCGGCTGGT CACCCTGCTC GGCCCCGGAG GCGCGGGCAA GACCAGGCTG
TCGATCGAGT CGGCCGAGGC GGTCGCCGGG CGGATGCCCG ACGGGGTGTG GCTGGTCGAG
CTCGCCCCGG TGGCCGAGCC GTCCGAGGTC CCGCAGGCCG TGTTCTCGGC ACTGGAGCTG
CGCGACCCCC CTCCGCCGGC ATCCCTCACG ACCTCGGGGG CGCTCCCCCT GCCCGCCGCC
CGTGACCCGC TGGCCCGCCT CGTCTCCGGC CTCGCCGGGA AACGGCTGCT GATCGTCCTG
GACAACTGCG AGCACGTGGT CGAGGCGGCG GCGGCGCTCG CCGACCGGGT GCTGGCGGGC
TGTCCCGGGG TGCGCATCCT GGTCACCAGC CGTGAACCGC TCGGCATCAC CGGAGAGACG
AGCCGGCCGG TGCCGCCCCT CGGCCTCCCG CCGGGCGACG GCGACCCGGG CGACGCCCTC
GGCTACCCGG CCGTCCGCCT GTTCGCCGAG CGTGCCGCGG CCGTCCGCCC CGGTTACCGG
GCCGAGGACG AGGCCGCCGC GGTGGTGCGG ATCTGCCGCG AGCTCGACGG CATGCCGCTC
GCGATCGAGC TGGCCGCCGC CCGCCTCCGC TCGCTCTCCG CCGAGCAGAT CGCGCACCGG
CTCGACGACC GCTTCCGCCT GCTGACCGGC GGCAGCCGTA CGGCGTTGCC CCGCCACCAG
ACGCTCCGCG CGGTGGTCGG GTGGAGCTGG GACCTGCTGG ACGAGCAGGA GCGGGTGCTG
GCCCGCCGCC TGTCCGTCTT CGCCGGGGGC GCCGCCCTCG ACTGCGCCGA GGAGATCTGC
TCGGGGCACG GCCTGGACCG GGCCGAGGTG CTCGACGTGC TGGCCCGGCT GGTGGACAAG
TCCCTGGTGG TGGCCCAGAG CCACGGCGCC GCCGTCCGTT ACCGGATGCT GGAGACCATC
CGCGCCTACG CCGCCGAGCG GCTGGCCGAG TCGGGTGAGC AGGGCCGCGT ACGGCTGGCC
CACGCGATGT TCTTCACCGA GCTGGCCGAG AGGTCCGATC CCGGCCTGCG CGGTCGCGGG
CAGCTCGCCG TCGTCGCCGA GATGGCCGCC GAGCACGACA ACCTGTCGGC CGCGCTGCGC
TGGACCGTCG AGGCGTCCCG CTCCGACCTG GCGCTGCGGC TGGTCGGTGC CCTGGGGTGG
TATTGGTGGC TGCGCGGCTA CCGGGCCGAG GGCGCCCACC GCGCGCACGA GGTGCTCAGG
CTCGCGGGCG ACGACGCCGA CCCCGCCCGG CTCACCCTGG CCCGCGCCTC CTACGGGGCC
AACGCGGTGG GCGGCGGCAT CGAGCTCGAC ACGGCGCGCG CCGAGCTCGC CGAGGTGGTA
CGGCTGGCCC GTGAGGAGCT GGCCCGGCCG TGGCACCCCC TGATCGTGAT GGCGGGCCCG
ATCATCGCGC TGGTCACGGG CCTGCCCACC GGCAACGACC ACCACCTCGA CGAGATGCTC
GCCCATCCCG ACCCCTGGGT GCTCGCCTCG GCACGGCTGT TCCAGGGGTT CGACCACCTG
TCCACGGGCC GCATCCCCGA GGGCAGGGCC AAGCTGTCGG CCGCCCTGCG CGACTTCCAG
GGGATCGGGG ACCGCTGGGG CGTCGCCAAC GTGCTCGCCT CGCTGTCGGA CCTGCACTTC
CTCCAAGGCG AGCCCGAACG GGCGCTGGAG GAGGTCCACC GGGCCATCGC CCTGATGGAG
GAGATCGGCG CGGTCGACGA GGTCGCCTAC ATGCGAGGCC GTCTGGCGGT CGGGCTCAAC
CTCACGGGGG ACAGGGCGGC GGCCGAGGAG ATCCTGGAGG AGACCCTCCG CGACGCCGTC
AGGAGCGGGG ACCGGATCGC CGCCCTGTCT CTGCTCAGTG CCCGGGGGGA CTTCGCCCGC
GAGGACGGCA AGCTCGACGA GGCCAGGCAC TACTACGCCG AGGCCATGCG GGTGGTCGAG
GAGACGCCCA GCGTCTCGCT GCAGATGCGG GCCTCGGTCA ACGCGGTCCT GGGCCTGCTG
GCCGAGCAGG AGGGCGACCT GCCCCGCGGC AGGCGGCTGC TCGGCACCGC GCTGGAGCAG
GCCTCGGAGA CGGCGGACGT GGCCGTGATG GGCCTGGTGC TGATCGGCTG CGCCGGGCTG
GTGCTCTCGG AGGGCGACCC CGCCACGGCG GCCATGCTCC TCGGCGGTGC CGCGGCGGTC
CGCGGCATCG ACGCGGTGGT CGACTTCGAC CACGTACGGA TCACCGAGCG CACGATGGCC
GCGCTCGGCC GGCAGGAGTA CTCCCGGTAC TACGAGCGCG GCCGCCTGAT GCCCCGAGAG
AAGATCATCG CACTGGCGGG CTAG
|
|---|
| Protein sequence | MRLDTEMTFA ILGPLEIRRC GATVEIAGQR LRTLLGLLLL DAGRVVPVDR LIAGVWEDRP
PNAAGNALQA LISRLRAALA DQRGLVEADA AGYRLAVDPG RVDAHRFTRL AAEGRAALAA
GSPADAATAL HAALALWRGP ALADLAGNDT VAAAITRLDT LRLAALEDRV ETDLLLGRQA
EAAAELPGVI AAHPLRERLR GQLMRALYGS GRHVEALASY EDARAVFADR LGVDPSPELV
GLHLSMLRRE WAENGLRLPS PDRDGRGLPV PAEVPRRGNL PARLTSFVGR ERDVARTAEL
LAGHRLVTLL GPGGAGKTRL SIESAEAVAG RMPDGVWLVE LAPVAEPSEV PQAVFSALEL
RDPPPPASLT TSGALPLPAA RDPLARLVSG LAGKRLLIVL DNCEHVVEAA AALADRVLAG
CPGVRILVTS REPLGITGET SRPVPPLGLP PGDGDPGDAL GYPAVRLFAE RAAAVRPGYR
AEDEAAAVVR ICRELDGMPL AIELAAARLR SLSAEQIAHR LDDRFRLLTG GSRTALPRHQ
TLRAVVGWSW DLLDEQERVL ARRLSVFAGG AALDCAEEIC SGHGLDRAEV LDVLARLVDK
SLVVAQSHGA AVRYRMLETI RAYAAERLAE SGEQGRVRLA HAMFFTELAE RSDPGLRGRG
QLAVVAEMAA EHDNLSAALR WTVEASRSDL ALRLVGALGW YWWLRGYRAE GAHRAHEVLR
LAGDDADPAR LTLARASYGA NAVGGGIELD TARAELAEVV RLAREELARP WHPLIVMAGP
IIALVTGLPT GNDHHLDEML AHPDPWVLAS ARLFQGFDHL STGRIPEGRA KLSAALRDFQ
GIGDRWGVAN VLASLSDLHF LQGEPERALE EVHRAIALME EIGAVDEVAY MRGRLAVGLN
LTGDRAAAEE ILEETLRDAV RSGDRIAALS LLSARGDFAR EDGKLDEARH YYAEAMRVVE
ETPSVSLQMR ASVNAVLGLL AEQEGDLPRG RRLLGTALEQ ASETADVAVM GLVLIGCAGL
VLSEGDPATA AMLLGGAAAV RGIDAVVDFD HVRITERTMA ALGRQEYSRY YERGRLMPRE
KIIALAG
|
|---|
| |