Gene Sros_6787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6787 
Symbol 
ID8670096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7473645 
End bp7474451 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003342239 
Protein GI271968043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000212784 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACGA TGACCGTACC TGCCCCGGCG CCGGCCAAAC GGGCCGGCCT GTCGGCGGGG 
ATCCGCCAGA CGATGACGCT CACCTGGCGC AGCCTGGTGC AGATCAAGCA CAACCCCATG
GAGCTGCTCG ACCTGAGCGT GCAGCCGGTG ATGTTCCTGC TGCTGTTCAC CTACGTGTTC
GGCGGCGCCA TCGCCGGGAG CACCGAGGAC TACCTGCAGT TCGCGCTGCC CGGCCTGGTC
GTGCAGAACG CGCTGTTCGC CACGTTGACC ACGGCGATCG GCCTCAACAC CGACATCACC
AAGGGCGTCT TCGACCGGCT GCGCAGCCTG CCGATCGCCC GCACCGCGCC GCTGGCGGGC
CGGATCATCG CCGACACCGC CAAGCAGCTC TGGGCGCTGT TCCTGTTCCT CGGGATCGGC
ACGATCCTGG GCTTCCGGAT CCAGACCGGC GTGGCCGGCG TGCTGGGCGC GGTGGCCCTG
CTGCTGGCCT TCGCACTGGC GATGTCCTGG ATGTCGGTGC TCATCGGCCT CAAGGCGAAG
GACCCGGAGA AGGTGCAGAT CTTCGCGTTC TCCCTGATGA TGCCGCTGAC GTTCACCAGC
AACGCCTTCG TGCCGACCGA CACGATGCCC GGCTGGCTGC AGGTCTGGGT GGACGTCAAC
CCGGTGACGC AGCTCGCCGA CGCCGTCCGC GGGCTGCTGA TCGGCGGCGA GGTGGCAGGG
CCGACGATCA GCTCGCTGCT CTGGGCCGTC GCGCTGGTGG TGGTCTTCGC CCCGCTGGCG
ATCCGCGCAT TCCGCGGCCG GGCCTAA
 
Protein sequence
MTTMTVPAPA PAKRAGLSAG IRQTMTLTWR SLVQIKHNPM ELLDLSVQPV MFLLLFTYVF 
GGAIAGSTED YLQFALPGLV VQNALFATLT TAIGLNTDIT KGVFDRLRSL PIARTAPLAG
RIIADTAKQL WALFLFLGIG TILGFRIQTG VAGVLGAVAL LLAFALAMSW MSVLIGLKAK
DPEKVQIFAF SLMMPLTFTS NAFVPTDTMP GWLQVWVDVN PVTQLADAVR GLLIGGEVAG
PTISSLLWAV ALVVVFAPLA IRAFRGRA