Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6787 |
Symbol | |
ID | 8670096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 7473645 |
End bp | 7474451 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC-2 type transporter |
Protein accession | YP_003342239 |
Protein GI | 271968043 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000212784 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACGA TGACCGTACC TGCCCCGGCG CCGGCCAAAC GGGCCGGCCT GTCGGCGGGG ATCCGCCAGA CGATGACGCT CACCTGGCGC AGCCTGGTGC AGATCAAGCA CAACCCCATG GAGCTGCTCG ACCTGAGCGT GCAGCCGGTG ATGTTCCTGC TGCTGTTCAC CTACGTGTTC GGCGGCGCCA TCGCCGGGAG CACCGAGGAC TACCTGCAGT TCGCGCTGCC CGGCCTGGTC GTGCAGAACG CGCTGTTCGC CACGTTGACC ACGGCGATCG GCCTCAACAC CGACATCACC AAGGGCGTCT TCGACCGGCT GCGCAGCCTG CCGATCGCCC GCACCGCGCC GCTGGCGGGC CGGATCATCG CCGACACCGC CAAGCAGCTC TGGGCGCTGT TCCTGTTCCT CGGGATCGGC ACGATCCTGG GCTTCCGGAT CCAGACCGGC GTGGCCGGCG TGCTGGGCGC GGTGGCCCTG CTGCTGGCCT TCGCACTGGC GATGTCCTGG ATGTCGGTGC TCATCGGCCT CAAGGCGAAG GACCCGGAGA AGGTGCAGAT CTTCGCGTTC TCCCTGATGA TGCCGCTGAC GTTCACCAGC AACGCCTTCG TGCCGACCGA CACGATGCCC GGCTGGCTGC AGGTCTGGGT GGACGTCAAC CCGGTGACGC AGCTCGCCGA CGCCGTCCGC GGGCTGCTGA TCGGCGGCGA GGTGGCAGGG CCGACGATCA GCTCGCTGCT CTGGGCCGTC GCGCTGGTGG TGGTCTTCGC CCCGCTGGCG ATCCGCGCAT TCCGCGGCCG GGCCTAA
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Protein sequence | MTTMTVPAPA PAKRAGLSAG IRQTMTLTWR SLVQIKHNPM ELLDLSVQPV MFLLLFTYVF GGAIAGSTED YLQFALPGLV VQNALFATLT TAIGLNTDIT KGVFDRLRSL PIARTAPLAG RIIADTAKQL WALFLFLGIG TILGFRIQTG VAGVLGAVAL LLAFALAMSW MSVLIGLKAK DPEKVQIFAF SLMMPLTFTS NAFVPTDTMP GWLQVWVDVN PVTQLADAVR GLLIGGEVAG PTISSLLWAV ALVVVFAPLA IRAFRGRA
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