| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6730 |
|---|
| Symbol | |
|---|
| ID | 8670039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 7405570 |
|---|
| End bp | 7407642 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein |
|---|
| Protein accession | YP_003342182 |
|---|
| Protein GI | 271967986 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.726923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.11091 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGACA TCAAGGAACT CTTCGCCGAC GAGGTCGTCA CCAGGGCGAT CGTCCGCGAC
GTGGAGCTGC CGTACGGCGC GGGCACGATG GCCCTGATCA CGCTGGACAA CGGCTTCGAC
CACACCAAGC CGTCCACGTT CGGCCCCGGA GGCCTCACCT CGCTGGACGA GGCTCTGGAC
TCGGTGGCCG GCCGCGGCGA CCTGGCGGCC GTGGGCGTTA TCGGCAAGCC GTTCATCTTC
GCGGTGGGCG CCGACCTCAA GGGCGCCGCG ACGGTCTCCG AGCGGGACCA GGCGCTGCGG
ATCGGCAAGC TGGGCCACGA GGTGTTCCGC CGCCTCGGCG AGCTGGAGGT GCCGTCGTTC
GCGTTCGTGA ACGGCGCGGC GATGGGCGGC GGCCTGGAGG TCGCCCTCCA CTGCACCTAC
CGGACCATCT CCTCCGGCGT GCCCGCGGTG GCCCTGCCCG AGTGCTTCCT GGGCCTGGTG
CCCGGCTGGG GCGGCACCCA GCTGCTGCCC CGCCTGATCG GCCCGGCCGC GGCCATCAAG
CTGATCATCG AGAACCCGCT CTCGCAGAAC CGCATGATCA AGGGCCGCGA CGCCTTCGCG
GCCGGCGTCG CCGACGCGAT GTTCGAGCCC GCCGACTTCC TGGAGGAGTC GCTGCGCTGG
GCGGCCCGGG TGCTGCGCGG CGAGGTGACC GTCTCCCGGA CCGACCACAC CGCCGAGGAC
TGGTCCAAGA CCGTCGCCGA CGCCCGCTTC CTGGTCGACA TGAAGCTGCA CGGCGCCTCC
CCCGCCCCCT ACCGGGCGCT GGAGCTGATC GAGCTGGCCC GCACCGCCTC GCGCGACGAG
GGCTTCGACG CCGAGGACCA GGCCCTGGCC GACCTCCTCA TGGGCGACGA GCTCCGCGCC
GGCCTCTACT CCTTCGACCT GGTGCAGCGC CGGGCCAAGA AGCCCGCCGG CGCTCCCGAC
AAGGCCCTGG CCCGCAAGGT CACCAAGGTC GGCGTCGTCG GCGCGGGCCT GATGGCCTCC
CAGATGGCGC TGCTGTTCGC GCGCCGCCTG GAGGTCCCGG TCGTGCTGAC CGACCTGGAC
CAGGCCCGGC TGGACAAGGG TGTCGGCTAC GTCCACGCCG AGATCGACAA GCTCCTCGGC
AAGGGCCGCG TCTCCGGCGA CCAGGCCAAC CGGCTCAAGG CCCTGGTGAC CGGTTCGCTG
ACCAAGGACG CGTTCGCCGA CGCCGACTTC GTCATCGAGG CGGTCTTCGA GGACCTGAAG
GTCAAGCAGA AGGTGTTCGC CGAGGTGGAG GAGGTCGTCT CCGCCGAGTG CGTGCTGGCC
ACCAACACCT CCTCGCTGCC GCTCACCGAG ATGGCCTCCT CGCTGAGGCA CCCCGAGCGG
GTCGTGGGCT TCCACTTCTT CAACCCGGTG GCCGTGATGC CGCTGCTGGA GATCATCCGG
GGCGCCGAGA CCGACGACGC GACGCTGGCC ACGGCCTTCT CGGTCGGCCG GTCGCTGAAG
AAGTCGTCCG TGCTGGTCAA GGACGCGCCC GCGTTCGTGG TCAACCGGCT CCTGACCCGG
TTCATGGGCG AGGTCATCGG CGCCGTCGAC GAGGGCACCC CCCTGGAGGT CGCCGACCAC
GCGCTGGACG GGCTCGGCCT GCCGATGACC CCGTTCACCC TGCTCCAGCT CGTCGGCCCG
GCCGTCGCGC TGCACGTCGC CGAGACCATG CACGCGGCCT TCCCGGCCCG CTACGGCGTG
TCGGACAACC TCGCCCGGCT GGTCGCGGCG GGCAAGCCCG GCGTCTACGC CCCGGACTTC
TCCCTGGACG CCGAGGCGGT GGCCCTCTTC TCCGGCGGGA CCTCCCCGTC GACCGCCGAG
GAGGTACGGC TGCGCGCGCT GCGGGCGCTT GAGGAGGAGA TCCGCCTCAT GCTCGACGAA
GGCGTGGTCG CGGCCGCCCA GGACATCGAC CTGTGCATGA TCCTCGGCGC GGGCTGGCCG
TTCCACCTGG GCGGCATCAC CCCGTACCTG GACCGGACCG GGATCGCCGA GCCGCGCTTC
CTGCCGCCGG GCGTGGCCTC CGTCCCCGCC TAG
|
|---|
| Protein sequence | MTDIKELFAD EVVTRAIVRD VELPYGAGTM ALITLDNGFD HTKPSTFGPG GLTSLDEALD
SVAGRGDLAA VGVIGKPFIF AVGADLKGAA TVSERDQALR IGKLGHEVFR RLGELEVPSF
AFVNGAAMGG GLEVALHCTY RTISSGVPAV ALPECFLGLV PGWGGTQLLP RLIGPAAAIK
LIIENPLSQN RMIKGRDAFA AGVADAMFEP ADFLEESLRW AARVLRGEVT VSRTDHTAED
WSKTVADARF LVDMKLHGAS PAPYRALELI ELARTASRDE GFDAEDQALA DLLMGDELRA
GLYSFDLVQR RAKKPAGAPD KALARKVTKV GVVGAGLMAS QMALLFARRL EVPVVLTDLD
QARLDKGVGY VHAEIDKLLG KGRVSGDQAN RLKALVTGSL TKDAFADADF VIEAVFEDLK
VKQKVFAEVE EVVSAECVLA TNTSSLPLTE MASSLRHPER VVGFHFFNPV AVMPLLEIIR
GAETDDATLA TAFSVGRSLK KSSVLVKDAP AFVVNRLLTR FMGEVIGAVD EGTPLEVADH
ALDGLGLPMT PFTLLQLVGP AVALHVAETM HAAFPARYGV SDNLARLVAA GKPGVYAPDF
SLDAEAVALF SGGTSPSTAE EVRLRALRAL EEEIRLMLDE GVVAAAQDID LCMILGAGWP
FHLGGITPYL DRTGIAEPRF LPPGVASVPA
|
|---|
| |