Gene Sros_6721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6721 
Symbol 
ID8670030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7395223 
End bp7396260 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content73% 
IMG OID 
ProductUroporphyrinogen decarboxylase 
Protein accessionYP_003342173 
Protein GI271967977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.232366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.50707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCCCG AGCTTGCCGA CTCTCCGTTC CTGCGCGCCT GCCGCCGCCT GCCCGTCTCC 
CGCACGCCCG TGTGGTTCAT GCGCCAGGCC GGTCGCTCGC TGCCCGAATA CCGGGCCGTG
CGCGGAGAGG TGCCGATGCT CACCGCGTGC GCCACCCCCG AGCTCATCGT GGAGATCACG
ATGCAGCCGG TCCGCCGCTA CGGCGTGGAC GCGGCCATCT TCTTCAGCGA CATCGTGGTG
CCGCTCAAGG CGATCGGGAT CGACCTGGAC ATCAAGCCCG GGGTCGGCCC GGTGGTGGCC
GAGCCGATCA GGGACGCCGC CGCGATCGAG ACGCTGCGCC CCATCGAGCC CGGCGACGTC
TCCTACGTCA CCGAGGCCGT GCGGGCGCTG ACCGGCGAGC TGGGCCCGAC CCCGCTCATC
GGCTTCGCGG GCGCGCCGTT CACCCTGGCC TCGTATCTCA TCGAGGGCGG CCCCTCCAAG
AACCACGACC ACACCAAGGC CATGATGTAC GGCGAGCCGC GTCTGTGGCA CGCCATGATG
GAGCGACTGA CCGGGATCAC CCTCGAATTC CTGCGCATCC AGATCGCCGC CGGGGCCTCG
GCCGTCCAGC TCTTCGACTC CTGGGTCGGC GCCGTCGCCC CCGAGGACTA CCGCGAGTTC
GTCCTCCCCC ACACCAGCCG CATCTTCGCC GGCCTGGCCG ACCTGGACGT CCCCCGCATC
CACTTCGGCG TCGGCACCGG CGAGCTGCTC GCCCTGCTCG GTGAGGCCGG GGCCGACGTG
GTCGGCGTCG ACTGGCGGGT CCCGCTCGAC GAGGCCGCCA GGCGGGTCGG GCCGGGCAAG
GCCCTGCAGG GCAACCTGGA CCCGGCGACG CTGTTCGCCC CCTGGGAGGT CGTCGAGCGC
CGCGCGGCCG ACATCCTCGC CCGCGGGGCC AAGGCCGAGG GCCACATCTT CAACCTCGGC
CACGGCGTGC CGCCTAGCAC CGACCCCGAC CAGCTCGCCC GCCTCACGGA CTTCGTGCAC
AGGGCCTCGG CCCGCTGA
 
Protein sequence
MTPELADSPF LRACRRLPVS RTPVWFMRQA GRSLPEYRAV RGEVPMLTAC ATPELIVEIT 
MQPVRRYGVD AAIFFSDIVV PLKAIGIDLD IKPGVGPVVA EPIRDAAAIE TLRPIEPGDV
SYVTEAVRAL TGELGPTPLI GFAGAPFTLA SYLIEGGPSK NHDHTKAMMY GEPRLWHAMM
ERLTGITLEF LRIQIAAGAS AVQLFDSWVG AVAPEDYREF VLPHTSRIFA GLADLDVPRI
HFGVGTGELL ALLGEAGADV VGVDWRVPLD EAARRVGPGK ALQGNLDPAT LFAPWEVVER
RAADILARGA KAEGHIFNLG HGVPPSTDPD QLARLTDFVH RASAR