Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6710 |
Symbol | |
ID | 8670019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 7383155 |
End bp | 7384195 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | ATP-dependent DNA ligase |
Protein accession | YP_003342162 |
Protein GI | 271967966 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00369161 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.292979 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCTGC CGATCGCGCC GCCGCTCGCG CCGATGCTGG CCAAGGCGGT CAGGAGCCTG CCGCCGCAGG ACGGCACCCT GTTCTACGAG CCCAAGTGGG ACGGCTTCCG GTGCGTGGTG TTCCGCGACG GGGACGAGGT CTATCTCGGC AGCCGCAACG AGCGGCCGTT CACGCGCTAC TTCCCCGAGC TGGTCGAGGC GGTGCGGGCG GAGCTGCCCG ACCGGGTGGT GGTCGACGGG GAGATCGTCG TCCGCGACGG CCAGACGCTC GACTTCGAGG CCCTGCAGCA GCGCATCCAT CCGGCCGCCT CCCGGGTGCG GCTGCTGGCC GGGCAGACCC CGGCGTCGTT CGTCGCCTTC GACCTGCTGG CCCTGGGTGA GGAGTCCCTG CTGGACGTCC CGTTCGCGGC CCGTCGCACG AGGCTGGAGT CGATCTTCGG CGGCGCGGGG CACGCGGTGC GGCTGACGCC GATCACCACG TCCGAGGAGC GGGCCGCCGA GTGGTTCGCC GCCTTCGAGG GCGCGGGGCT GGACGGCATC GTGGTCAAGC CGGGCGGCCT GCCGTACCAG CCGGACAAGA GGGTCATGTC CAAGGTCAAG CACGAGCGGA CGGCCGACGT GGTGGTGGCC GGATACCGGG AGCACAAGTC GGGCCCGGTG GTCGGGTCCC TGCTCCTGGG GCTCCACGAC GCCGAGGGCG TGCTCCACCA CGTCGGCGTC GCGGCGTCCT TCACGATGAA GCGCCGGGCC GAGCTGGTCG AGGAGCTCGC CCCGTACGTG AGCCGGGACG GCGACCATCC CTGGAGCGCC GCCTCGCTGC CCGGCGCGAT CTCCAAGTGG AGCGCCACCA AGGACCTGTC GTTCGTGCCC CTGCGGTCGG AGCTGGTGGT GGAGGTCGCC TACGACCACA TGGAGGGGCG CCGTTTCCGG CACACCGCCC AGTTCCGCCG CTGGCGCCCC GACCGCACTC CCGAGTCGTG CACCTACGAG CAGCTCGAAC GGCCGGTCTC CTACGACCTG GACGACATCC TGACCGGTTA G
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Protein sequence | MRLPIAPPLA PMLAKAVRSL PPQDGTLFYE PKWDGFRCVV FRDGDEVYLG SRNERPFTRY FPELVEAVRA ELPDRVVVDG EIVVRDGQTL DFEALQQRIH PAASRVRLLA GQTPASFVAF DLLALGEESL LDVPFAARRT RLESIFGGAG HAVRLTPITT SEERAAEWFA AFEGAGLDGI VVKPGGLPYQ PDKRVMSKVK HERTADVVVA GYREHKSGPV VGSLLLGLHD AEGVLHHVGV AASFTMKRRA ELVEELAPYV SRDGDHPWSA ASLPGAISKW SATKDLSFVP LRSELVVEVA YDHMEGRRFR HTAQFRRWRP DRTPESCTYE QLERPVSYDL DDILTG
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