Gene Sros_6677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6677 
Symbol 
ID8669986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7350871 
End bp7352157 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003342130 
Protein GI271967934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.306335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.32672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAAA TCCCCACAAA TGTCGACATT TCCCCCCAGA TTGGGGGGCA AATCGCCACC 
GTCCAGCGGC GGACGCTCGC CGTCCTGTCC GTCGCGCAGA TCACCAGCGG GGTCGGGGTC
GCGGTGGGCT TCGCCTTCAG CTCGCTGGTG GTCGCCCAGC TCTCCGGCTC CGTGTCGATC
AGCGGGCTGG CCGGGACCGC CTCCGTGCTC GGGGCCGCGC TGCTGGCCCT GCCCACCGCC
AGAGCCTCGG GCAGGAGCGG GCGGCGGGCC GGGCTGGCCC TGGCCTACGG CTGCGCCCTG
CTCGGCTGCC TGATCACGGT GGTCGCCATC ACCGTCCGCT CGTGGCCGCT GATGCTGGCC
GGGCTGGTGC TGTTCGGCGG CGCGAGCGCG GGCAGCCTGG CCTCCCGCTA CTCCGCGACC
GACCTGTCCC CGCCGGGACA CTCCGCCCGG CACCTCTCGT GGGTGGTGTG GGCCGCCACG
ATCGGCTCGG TCGCCGGCCC GAACCTCGCC GAACCGGCCG ACCACCTCGG CCGCAGGCTC
GGCCTCGCCC CGGACACCGG CCCGTTCGCG CTCTCCCTGC TGGCCTTCGC GATCGCGCTG
GCCGTCATCG TGATCGGCCT GCGTCCCGAC CCGCTGCTGC TGGCCCGCTC GACCGCCCCC
GCCCCCGCCT CCGCTCCCGG CACGACCGTG CCCGCCGCGC GGGCCCGGGG GACCCTGCGC
ACCGCCTGGC AGGCCCTGCG CCAGGCTCCG GCGGCGGTGC GGGCTCTCGT CGCGATCGCG
GTCAGCCACA CCGCGATGGT GTCGGTCATG TCCATGACCC CGGTCCACCT CGACCACGGC
GGCTCGCCGA ACTGGGTCAT CGGGATCGTG CTCAGCCTGC ACATCGCGGG CATGTACGTC
CTCTCCCCGC TGGTCGGCTG GCTGGCCGAC CGGATCGGCC GGGTCCCGGT GCTGACGCTC
GGCATGGGCC TGCTGCTCGC CGCCGCCGTC CTCGCCGGTA CGGCCGGGCC GCACGGCGTC
ACCCAGGTGT CGGCCGGCCT GGCCCTGCTC GGCGCCGGCT GGTCCTGCGG GCTGATCGCC
GGCTCGGCGA TGCTCAGCGA CGCCGTGCCG CTGGAGCACC GCCCCGCCGT ACAGGGCCTG
TCGGACCTGC TGATGAACGT CTGCGGCGCG ACCGGCGCGG TGGCCGCCGG CGTCATCGTG
GGCGCCCTGT CCTACGGCGT GCTCGGCACG GTCGTGGCGG TCATGGTGAC GATCACCGGT
GCCTGGCTGA CGCTGAAGCG CACCTGA
 
Protein sequence
MTKIPTNVDI SPQIGGQIAT VQRRTLAVLS VAQITSGVGV AVGFAFSSLV VAQLSGSVSI 
SGLAGTASVL GAALLALPTA RASGRSGRRA GLALAYGCAL LGCLITVVAI TVRSWPLMLA
GLVLFGGASA GSLASRYSAT DLSPPGHSAR HLSWVVWAAT IGSVAGPNLA EPADHLGRRL
GLAPDTGPFA LSLLAFAIAL AVIVIGLRPD PLLLARSTAP APASAPGTTV PAARARGTLR
TAWQALRQAP AAVRALVAIA VSHTAMVSVM SMTPVHLDHG GSPNWVIGIV LSLHIAGMYV
LSPLVGWLAD RIGRVPVLTL GMGLLLAAAV LAGTAGPHGV TQVSAGLALL GAGWSCGLIA
GSAMLSDAVP LEHRPAVQGL SDLLMNVCGA TGAVAAGVIV GALSYGVLGT VVAVMVTITG
AWLTLKRT