Gene Sros_6573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6573 
Symbol 
ID8669882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7234256 
End bp7235203 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003342029 
Protein GI271967833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00469917 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0258575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGAA GGCTTCATGA GCTGGACGCG CTCCGCGGCT TCGCGGTGTG CGGGATCATG 
CTGGTCAACA CCTGGCAGCA CACCCGCGAG CAGCTCGGCG CCCCGGACCG GAACGCGGTC
GACTGGGCGA TCGACAACCT CCTGCAGAGC AGGTTCTATC CGATCTTCTC GTTCCTGTTC
GGGCTGAGCT TCGTCCTCTT CCTACGGTCC GCGGCCGAGC GGACGGACCA CCCCCGGGTG
GTGCTGCTGC GCAGGCTCGC GGTGCTGGCG TGCTTCGGCC TGGTCCACCA GCTCGTGAAC
CCGGGCGAGG TGCTCCTGCC GTACGCGATC TTCGGGGTGC TGGTCCTGCT GCCCGCCTCC
TTCCTCCCCC GCCCGGCGGT GCCGGTGCTG GGGCTGGCCG TCACCGCCTG GGCGGTGCAC
GAGGGGGGCG GGATGAAGCT CATCCCGGGA CTGTTCCTGC TGGGCATGGC CGTGATGGAG
TACCCGCCGC CCGAGTGGCT GCTGCCCCCC TCCTTCGCGG TCAGCGCCGT GCTCGCGGTG
GGGCTCGGCT ACCTGTGGAT CCGCACCCTC GACGACCCCG GCCTCTTCTA CCGGGGCACC
TACCCGGCCG CCGGGCTGGC CGCCGCGGTG GCCTACTGCA CCGGGCTGCT GCTGCTCCTG
CGGTCCCGGC CACGCGACGC GCTGCTGGCG GTCCTGGCCC CGCTCGGCCG GATGGCGCTG
ACGAACTACC TGGTCAGCAC CGCGGTCATC CTGCTGGCGC TGCCGCTGCT CACCGCCGAC
CCGACCCGGA TCGCCGGCGT GCTGCTGTCC GCCGGCGTGC TGGCGCTCCA GGTCGTCCTC
AGCCGGAAGT GGCTGGCCAG GTTCAGGTAC GGCCCGCTGG AATGGCTGTG GCGCCGCCTG
ACGTGGATGG AGGCGGCGCC GAACCGCCGG ATAGGGTCGA ACGCGTGA
 
Protein sequence
MTRRLHELDA LRGFAVCGIM LVNTWQHTRE QLGAPDRNAV DWAIDNLLQS RFYPIFSFLF 
GLSFVLFLRS AAERTDHPRV VLLRRLAVLA CFGLVHQLVN PGEVLLPYAI FGVLVLLPAS
FLPRPAVPVL GLAVTAWAVH EGGGMKLIPG LFLLGMAVME YPPPEWLLPP SFAVSAVLAV
GLGYLWIRTL DDPGLFYRGT YPAAGLAAAV AYCTGLLLLL RSRPRDALLA VLAPLGRMAL
TNYLVSTAVI LLALPLLTAD PTRIAGVLLS AGVLALQVVL SRKWLARFRY GPLEWLWRRL
TWMEAAPNRR IGSNA