Gene Sros_6563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6563 
Symbol 
ID8669872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7224821 
End bp7225381 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003342019 
Protein GI271967823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0113679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGAGG TACGGCAGCG CGACCGGGAG GGCACCCGGC GCCGCATTCT CGACGCCGCC 
CGCCGGCTGT TCACCGAGCT GGGCTACGAC CAGGTGACGA TGCGGCTGAT CTCCGCGGAG
GCGGACGCCA ACGTCGCGCT GATCAACCGC TACTTCGGCT CCAAGCGGGA GCTGTTCGCC
GAGGTGCTCG CCATGCAGGG CCGCTTCCCC GGCGTGCTGG ACGTCCCCGA GGGAGAGCTG
CCCCGGCGCC TGGCGGAGTA CGTCGCCGAA CGCCTCCGCT CGGACCGGGG GAGCCCGGTC
ATGGCGGCGC TCATCCGGTC GGCGTCCTGC TCGGAGACCC ACGGGCTCAT CCGGGACCGG
GTCAGCTCGG CGATCCTGGA GCCGCTGGCC GCACGGCTGC CCGGACCGGA AGCGATCTTC
CGCGCGACCA TCGCCACCGC GCTCATCACC GGCGCCGGCA CCCTGAGCCA GCTCTACGGC
TCGGACGCGC TCGAGGCGCC CGACCAGGAG ACCGTGGTCA GGCGGCTCAC CGCGGTCTTC
GAGGCCTGCC TCAGGGCGTG A
 
Protein sequence
MDEVRQRDRE GTRRRILDAA RRLFTELGYD QVTMRLISAE ADANVALINR YFGSKRELFA 
EVLAMQGRFP GVLDVPEGEL PRRLAEYVAE RLRSDRGSPV MAALIRSASC SETHGLIRDR
VSSAILEPLA ARLPGPEAIF RATIATALIT GAGTLSQLYG SDALEAPDQE TVVRRLTAVF
EACLRA