Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6551 |
Symbol | |
ID | 8669860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 7188332 |
End bp | 7191517 |
Gene Length | 3186 bp |
Protein Length | 1061 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | alpha-L-rhamnosidase |
Protein accession | YP_003342007 |
Protein GI | 271967811 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.585079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000045666 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAACAGG CCGTCGCGGC CGCCCTCGCC GTCACCGATC TCCGGATGGA CGGCCGGACC GAACCCCTGG GCCTGGGCGA GAGCGCGCCG AGGTTCTCCT GGCGGCTCGC CGCTCCGGGC CGGGGCCGGG CCCAGAGCGC CTACCGGATC GTCGTGGGCC GCGAGTGCGA CCCGCTCGCC GAGGGCGCCG AGGTCCTGTG GGACACCGGC GAGGTCGGCT CGTCCCGGAC GTTCGACATC GCCTACGAGG GCGCGGAGCT GCGCCCGCGC ACGCGCTACC AGTGGCGTGC GCGGGCGGCC GACGAGGCCG GCACGTGGGG CGACTGGAGC CCGGCGCACT GGTTCGAGAC CGGGCTCGGC GACGTCACGG GGTGGACCGC CGACTGGATC GGCACGCCCG CCGTCCCCGG CTCGCAGCGG CTCCCGTCCC TGGAGAACGT GCCCCGCATC TGGGCCGCCG GTCCGCTCGG CCCGTCCGAG GCGCGGACCG GCGGTTTCCG CACCCGTTTC ACCGTGCCCG GCGGGGCACG TCCCCTGTCG GCGTGGCTGG TGATCGGCGG CGCGCTCGAT CCACAGGTCC ATCTCAACGG GATGCCCGTG GCGGGGGAGG TCCGCGACGG GGCGTTCGTG GCGGACGCCG GCGACCTGAT CGACTCCGGG GAGAACGTCC TGGCGCTGCG CGCCGGCGCC GTGGACGGCC TGCCCGGTGG GCTGTGCGTG CGTCTGGAGG TCGTCCTGGA AGGCCGCCCC GCCCTGCCCC AGCTCGTCCC GGTGGCCGGG GAGAGCGCCG TGACCGTGAC CTCGGACGGC CGCTGGCGGG CGGCGGGTGA GCCCGCGCCC GGGTTCGAAC AGCCCGGCTT CGACGACACC GGCTGGTCGC TCGCCGAGGA GGTGGGGCTG CACGGCGACC CGCCGCGGGG ACGCGAGCCG GTCGCGGACC GCCCGAGCCC CTACCTGCGC CGGGAGTTCG ACGTGCCCAG GCCGGTGAGC CGTGCCCGGC TGTACGCCAC CGCGCTCGGC GTCTACGAGC TGCACCTCAA CGGCATGCGG GTGTCCGCCG ACCACCTGGC GCCCGGCTGG ACCGACTACC GCCACCGTGT CACCTACCAG ACCTACGATG TGACGGCACT GGTCGCCGAG GGGGGCAACG CGCTCGGCGC GGTGCTGGCC GACGGCTGGT ACGCCGGCAA CATCAGCTGG TTCGGCTCCT TCCAGTACGG CAGGCGGCTG GCCCTGCGCG CCGAACTGGA GATCGTCCAC GACGACGGCA CCACGACCAG GCTGCGCACC GACTCCGACT GGCGGGCCGG CAGCGGCGCG ATCAGGTACG CCGACCTGCA GAACGGTGAG CGGCAGGATC TGGCGGCCGA GCCGGTGGGC TGGACCGCGT GCGGGTTCGA CGACTCCGGC TGGCTGCCCG CCGTACCGGT GAGCCCTCCG GCAGGGCGGC CGGCGGCGGC CGTCGCCCCG CCCGTCCGGG TGCACGAGGA GCTGGCGCCC CGGGCGGTGT GGGAATCGAG CCCCGGCGTC TGGATCGCCG ACTTCGGCCA GAACGTGGTC GGCTGGGTCC GGCTCACCGC CCGCGCCGGC CGGGATCGGC CGGTCGTGCT GCGCCACGCC GAGGTGCTCG ACCACGAGGG GGCGCTGCAC CTGGCCAACC TGCGCTCGGC CCGCGCCACC GACGAGTTCC TGCCGCGTGG CGGGGCGGGC GCGGAGACCT TCGAACCCCG CTTCACCTTC CACGGCTTCC GCTATGTCGA GGTGAGCGGG CTGCGCGAGC CGCTCACCTC GGACGCGATC CGGGCCCGGG TGGCCTACGC CGCGATGGAG CCGGCGGGCG AGTTCGCCTG CTCCGACGAG CGGCTCAACA GGCTGCAGGG CAACATCGTC CGGGGCCAGC GGGGGAACTT CCTGTCGATC CCGACGGACT GCCCGCAGCG GGACGAACGG CTGGGCTGGA CCGGTGACAT CTGGGCGTTC GCCCCTACGG CGCTGTTCAA CTACGACGCC CGGGCGTTTT TGCACAGCTG GCTCACCGAC GTGGTGGACG CGCAGGCCGA GGACGGCGCC GTGACCCACG TCGTGCCCGA CGTGCTCTCC GGCCGCGGCC TGTCACCCAA CCCCAGGGAG GCCGGCTCGC CCGGCTGGGG GGACGCCATC GTGATGCTGC CCTGGGCGCT GTACCGCCTG TGCGGCGACG CCGACGCCGT GGCCCGGTAC TACGGGCCGA TGCGCCGCTG GCTGGCCTAC CTGGACAGCC GCTCGACCGA CGGGATCTTC CCCGACGAGG GCTTCGGCGA CTGGCTGAGC ATCGGGGCCG ACACCCCCAA ACGGCTCGTC GGCACCGCGA TCTTCGCGCT GTCGGCGCGG CAGCTGGCCG AGCTGGCCGC CGCGCTCGGC CGCGCCGACG ACGAGCGGGC CTGCCTGGAG GTGTACGCCC GGGTCCGGCG GGCCTTCCGC GCCGCCTTCG TGCAGGGGCC GGGGGTGGTG GAGAGCGGCA CGCAGACCGC CTACGTGCTG GCCATCACCG CGGGCCTGCT GGAGGAGGCC GAGCTGCCCC GGGCCGCCGC GCGCCTGGTA CGCGACATCG AGGCGCGGGG CGGGCATCTG TCCACCGGCT TCCTCGGCAC GCCGTTCCTG CTCGACGCGC TGACCCGGTC CGGGCACCTC GGCACGGCCT ACCGGCTGCT GCTGCAGGAG AGCTTCCCGT CGTGGCTCTA CCCGGTCGTG CACGGCGACG CCACGACCAT GTGGGAGCGC TGGGACGGCT GGAGCCACCA CCGCGGCCTG CAGGACCCGG GCATGAACTC CTTCAACCAC TACGCCTACG GCGCGGTGGG CGCCTGGATG TACGAGACGA TCGGCGGCCT CGCCCCCGCC TCTCCCGGCT ACCGGGCCAT CGTGGTACGG CCGCGCCCCG GCGGGGAACT CACCTGGGCC AGGACGGCGT ACCGGACCAG GCACGGCCGG GTGGAGATCG CCTGGCGGCG GGAGGGCGGG GACTTCACCC TGGAGGTGAG GGTGCCGCCG AACACCCGTG CCGAGGTCTG GGTCCCCGGC GGGCCCGCGG GCGTGACCGA GTCGGGCCGC CCGGCGGCCG AGTCGCCCGG CGTCGCCCTC GACCGGGTCG TGGACGGGCA CGCCGTCTAC GAGGTCGGCT CGGGCTCCTA CGCCTTCCAC GTCTGA
|
Protein sequence | MEQAVAAALA VTDLRMDGRT EPLGLGESAP RFSWRLAAPG RGRAQSAYRI VVGRECDPLA EGAEVLWDTG EVGSSRTFDI AYEGAELRPR TRYQWRARAA DEAGTWGDWS PAHWFETGLG DVTGWTADWI GTPAVPGSQR LPSLENVPRI WAAGPLGPSE ARTGGFRTRF TVPGGARPLS AWLVIGGALD PQVHLNGMPV AGEVRDGAFV ADAGDLIDSG ENVLALRAGA VDGLPGGLCV RLEVVLEGRP ALPQLVPVAG ESAVTVTSDG RWRAAGEPAP GFEQPGFDDT GWSLAEEVGL HGDPPRGREP VADRPSPYLR REFDVPRPVS RARLYATALG VYELHLNGMR VSADHLAPGW TDYRHRVTYQ TYDVTALVAE GGNALGAVLA DGWYAGNISW FGSFQYGRRL ALRAELEIVH DDGTTTRLRT DSDWRAGSGA IRYADLQNGE RQDLAAEPVG WTACGFDDSG WLPAVPVSPP AGRPAAAVAP PVRVHEELAP RAVWESSPGV WIADFGQNVV GWVRLTARAG RDRPVVLRHA EVLDHEGALH LANLRSARAT DEFLPRGGAG AETFEPRFTF HGFRYVEVSG LREPLTSDAI RARVAYAAME PAGEFACSDE RLNRLQGNIV RGQRGNFLSI PTDCPQRDER LGWTGDIWAF APTALFNYDA RAFLHSWLTD VVDAQAEDGA VTHVVPDVLS GRGLSPNPRE AGSPGWGDAI VMLPWALYRL CGDADAVARY YGPMRRWLAY LDSRSTDGIF PDEGFGDWLS IGADTPKRLV GTAIFALSAR QLAELAAALG RADDERACLE VYARVRRAFR AAFVQGPGVV ESGTQTAYVL AITAGLLEEA ELPRAAARLV RDIEARGGHL STGFLGTPFL LDALTRSGHL GTAYRLLLQE SFPSWLYPVV HGDATTMWER WDGWSHHRGL QDPGMNSFNH YAYGAVGAWM YETIGGLAPA SPGYRAIVVR PRPGGELTWA RTAYRTRHGR VEIAWRREGG DFTLEVRVPP NTRAEVWVPG GPAGVTESGR PAAESPGVAL DRVVDGHAVY EVGSGSYAFH V
|
| |