Gene Sros_6495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6495 
Symbol 
ID8669804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7122343 
End bp7123572 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content68% 
IMG OID 
ProductTDP-4-oxo-6-deoxy-D-glucose transaminase 
Protein accessionYP_003341952 
Protein GI271967756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.773196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCGC AATGGCTCGC CAAGGGACAC GGGCGCAATG CGTGTCGGCC GTCCCGCCCG 
TTGTTCACTG CGAAGGTGAG CACAACCGGT CTGAAGACGA TTCCCTTCAA TCGAACGCAT
CTCTCGGAGA ACGAGCTCGA TTACCTCGCG CAGGCCGTAC GCCAGGGATC CACCTCGGGG
GACGGGCCGT TCACCCGGCG GGCCACCGGG CTCCTGCGCG AGCTGACCGG ATCGAGCGGG
GTGATGCTGA CCACCTCCTG CACACACGCG CTGGAGATGT CGGCGATCCT GCTGGACCTA
CGGCCCGGCG ACGAGGTGAT CATGCCGTCG TTCACCTTCA TGTCGACGGC CAACGCCTAC
GTCCTGCGCG GGGCGGTCCC GGTGTTCGTC GACTGCAGGC CCGACACCCT GAACATGGAC
GAGCGGCTGA TCGAATCCGC GATCACCGAC CGCACGCGGG CCGTCATGGT CGTGCACTAC
GCGGGTGTCG CCTGCGAGCT GGAGACGATC GGCGAGCTGT GCCGGCGGCA CGGTCTGGCT
CTCATCGAGG ACAACGCCCA CGGCCTGGGC GGGTCCTACA GAGGCCGGCC TCTCGGGTCG
TTCGGCCGGA TGGCCACCCA GAGCTTCCAC GAGACGAAGA ACGTGCAGTG CGGCGAAGGG
GGCGCGCTGC TGCTGAACGA CGCCGGCCTC GTCGCGCGTG CCGAGATCAT CCGGGAGAAG
GGCACCGACC GCAGCCGGTT CTTCCGAGGC CAGGTGGACA AGTACCGGTG GGTCGACATC
GGCTCCAGCT ATCTGCCGTC CGATGTTCTC GCCGCGCAGC TCACCTCCCA GCTGGAATCA
TTCGACAAGA TCCAGTTCCT GCGTCACGCC GTATGGCGGA GGTATCACGA GGAGCTCGCG
GACTGGGCCG CGGAGAACGG GGTCGCACAA CCCATGATCC CTGACGGCTG CGCACACCCG
GCGCACCTGT ACTACCTGCT GCTCCCGGAT CTGCGGGAGC GGCAGGCGTT CATCGCCCAC
CTCGCGGGCA GGGGCGTGCG GGCGGCATTC CACTACCAGC CGTTGCACAC CGCGCCGGCG
GGCGTGCGGT ACGGGCGGGT GGCCCCGGGC GGATGCCCGG TCACCGAGGA GTCCGCCGAT
CGTCTCGTAC GGCTGCCGCT GTTCGCCGAT CTGGACGAGG CCGGTGTGGC GAGTGTGCTC
GACGCCGTCC GGACCTACCG GGTGGGCTGA
 
Protein sequence
MLAQWLAKGH GRNACRPSRP LFTAKVSTTG LKTIPFNRTH LSENELDYLA QAVRQGSTSG 
DGPFTRRATG LLRELTGSSG VMLTTSCTHA LEMSAILLDL RPGDEVIMPS FTFMSTANAY
VLRGAVPVFV DCRPDTLNMD ERLIESAITD RTRAVMVVHY AGVACELETI GELCRRHGLA
LIEDNAHGLG GSYRGRPLGS FGRMATQSFH ETKNVQCGEG GALLLNDAGL VARAEIIREK
GTDRSRFFRG QVDKYRWVDI GSSYLPSDVL AAQLTSQLES FDKIQFLRHA VWRRYHEELA
DWAAENGVAQ PMIPDGCAHP AHLYYLLLPD LRERQAFIAH LAGRGVRAAF HYQPLHTAPA
GVRYGRVAPG GCPVTEESAD RLVRLPLFAD LDEAGVASVL DAVRTYRVG