Gene Sros_6467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6467 
Symbol 
ID8669776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7086730 
End bp7088385 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content65% 
IMG OID 
ProductBeta-lactamase class C and other penicillin binding protein-like protein 
Protein accessionYP_003341924 
Protein GI271967728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.341842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0569151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGAG CGTTGGATGT GACCCGGATG CGAGCTCGCG TCTCCGAGCT GCTCGCGGAG 
TACCGGATTC CGAGTGCCGC GATCGGCGTC CTCAGCGACG GGGAGATCAC CGACTTCGCG
GTCGGCGTCA AGAACATCTC CACGCGCGAG CCCGCGACGA CCGACACCGT CTACCAGTGC
GGCTCCGTAT CCAAGACATG GACCGCCCTC GCCTTCATGC AGCTCGTCGA CGAGGGGAAA
GTCGCCCTGG ACGAGCCGGT GCGGACCTAC CTTCCCGACT TCCGGGTCGC CGACCCCGGC
GTCAGCGCCA AGGTCACCCC CCGCCGTCTC CTCAACCACA CCAACGGCAT CGAGGAGAGC
TACGGAGATC CGGGCGAGGA CGACGACGTG TACGAGCGCA TGGTGGAGAA CATCGCCGGC
GCACCCCAGG TCCACCCCTT GGGCCACACT CACGGCTACA GCGCGGCCCT GGGCTACGCG
ATCCTCGCCC GCATCATGGA GGTGGTCGAC GGCAAGCGGT GGGACGACAT CATGAAGGAT
CGTCTGTTCG ACCCCTTGGG ACTGACCTCG ACGAGCAGCC GGCGTGAGCA CGTGGACCAG
GACCGGGCCG CGACCGGATA CCTGATCCGA TCCCTCCAAG AGGGCCCCGT CCTCTCACCG
CTGGGTCACC TGCCGCGCTC CTTCGGCCCC GGAGGCAACG TCAGCACGAC AGCCCGGGAA
TCGCTGATGA TGGCGTACGT CTTCCTCAAC GGAGGAAAGG CGCCGAACGG GACCAGAATC
ATCTCACCCG GCGCCATCCG CGAGATGACG GAGTCGCGGG TCCCCATACC TGACCCGTAC
ATGTTCGGGC CGGAATGGGC ACTCGGCCTC ATCGTGTGCG ATTGGCACGG CCAGACCGTC
TACGCCCACG ACGGCAGCGC GGTCAGCCAG AGCGCCCGCC TGCGGATCCT GCCGGAATCG
AACATCGCCG TCTCGATGCT GGTGAACGCC GGGCCACGCG ACAGCTTCTA CCGGAAGGTG
TTCAACGAAA TCCTGGCCGA CCTCGGCGCG GTCACGATCC CCGACCTGCC GGAGCCCGAC
CCGACCCTGG CCCTCGATCT GTCCAGGTAC GAAGGCTCCT ACGAGCGCCC CGGCACCCGC
TACGAAGTGG CGGCCGAACG CGGAAAGCTC CACCTCAAAT TCACCCTGAA CCCCATGGAG
GCGCAACTCC TCAACAGACC AGAACAGCTC GACTACGAGC TGCTCCCGAT CAGCGAGACC
CACTTCTTGA TGCCTTCGGA CGATCCGCTC GAGGACCCTC AGACCGTCGC GATCTACGAC
TTCAAGAACG GTGCCGCACA GTATCTTCAC ATCAATTGCC GAGTAAATCC GAAAGTCAAT
GAGGAGGGTG CCACGGTGCA CGTCATGACT GTTTCCACAA TTTCCGACAA CGACGGTTTC
TGGGGTTCTG TGAAGAAGGC GTACGGCCAG CTTCCCATGG GTGCCAAGTG GACGATGGCG
GTGGCGAGCA CCGACGGGAC CAAGGCGGTG AACGTCATCG TCCATGACTC GATCGACGGC
GTCAGAAGCT TCTTCGAGGA TCACACCGGC CCCTTCGCCA CGACGGAATA CTTCGAGGCC
GACGCGTCCA ACGCGGTCGG CCTCCCGACG ACGTAG
 
Protein sequence
MARALDVTRM RARVSELLAE YRIPSAAIGV LSDGEITDFA VGVKNISTRE PATTDTVYQC 
GSVSKTWTAL AFMQLVDEGK VALDEPVRTY LPDFRVADPG VSAKVTPRRL LNHTNGIEES
YGDPGEDDDV YERMVENIAG APQVHPLGHT HGYSAALGYA ILARIMEVVD GKRWDDIMKD
RLFDPLGLTS TSSRREHVDQ DRAATGYLIR SLQEGPVLSP LGHLPRSFGP GGNVSTTARE
SLMMAYVFLN GGKAPNGTRI ISPGAIREMT ESRVPIPDPY MFGPEWALGL IVCDWHGQTV
YAHDGSAVSQ SARLRILPES NIAVSMLVNA GPRDSFYRKV FNEILADLGA VTIPDLPEPD
PTLALDLSRY EGSYERPGTR YEVAAERGKL HLKFTLNPME AQLLNRPEQL DYELLPISET
HFLMPSDDPL EDPQTVAIYD FKNGAAQYLH INCRVNPKVN EEGATVHVMT VSTISDNDGF
WGSVKKAYGQ LPMGAKWTMA VASTDGTKAV NVIVHDSIDG VRSFFEDHTG PFATTEYFEA
DASNAVGLPT T